galaxyproject / pulsar

Distributed job execution application built for Galaxy
https://pulsar.readthedocs.io
Apache License 2.0
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Minimum versions of galaxy-* packages in requirements.txt need to be higher #311

Closed cat-bro closed 1 year ago

cat-bro commented 1 year ago

I could not restart pulsar after upgrading the pulsar-app version from 1.14.13 to 0.14.16. There were errors from this import and several others.

It was fixed by installing the latest versions of galaxy-util and galaxy-tool-util in pulsar virtual environment.

The install versions of galaxy packages in the virtualenv had previously been

galaxy-containers  20.5.0
galaxy-job-metrics 20.9.0
galaxy-objectstore 20.9.0
galaxy-tool-util   21.1.0.dev5
galaxy-util        20.9.1

which satisfy the required versions >=19.9.0 in requirements.txt so were not upgraded when the pulsar-app was upgraded.