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galaxyproject / tools-devteam

Contains a set of Galaxy Tools mostly written by the Galaxy Team.
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GATK 1.4 tools need to be run in a Py2 environment (all) #546

Closed jennaj closed 4 years ago

jennaj commented 4 years ago

MTS: https://toolshed.g2.bx.psu.edu/view/devteam/suite_gatk_1_4/3e6a4fcbf335

ping @mvdbeek @natefoo

bernt-matthias commented 4 years ago

Also there seems to be no conda package for version 1.4. (which is horribly outdated?) ..

nekrut commented 4 years ago

we've been talking about getting rid of it for a long time ... there is absolutely no reason to maintain this

Anton Nekrutenko Professor of Biochemistry and Molecular Biology Penn State University http://nekrut.bx.psu.edu http://nekrut.bx.psu.edu (814) 826-9628

On Wed, Feb 5, 2020 at 12:06 PM Jennifer Hillman-Jackson < notifications@github.com> wrote:

MTS: https://toolshed.g2.bx.psu.edu/view/devteam/suite_gatk_1_4/3e6a4fcbf335

ping @mvdbeek https://github.com/mvdbeek @natefoo https://github.com/natefoo

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