galaxyproject / tools-iuc

Tool Shed repositories maintained by the Intergalactic Utilities Commission
https://galaxyproject.org/iuc
MIT License
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MITOS: Timeout during install #3698

Closed menegidio-lab closed 3 years ago

menegidio-lab commented 3 years ago

I need to install Mitos locally and I see the error below:

(1/9) Installing repository mitos from iuc to section "annotate-mito" at revision f86bcffa9549 (TRT: 0:00:07.556675) Timeout during install of mitos, extending wait to 1h

This error is seen for Mitos and Mitos2, however, other tools install normally. The error is viewed by both the server https://toolshed.g2.bx.psu.edu and https://testtoolshed.g2.bx.psu.edu

I've been trying to install for two consecutive days. I will need the tool for a workshop.

Currently the settings are:

api_key: admin galaxy_instance: http: // localhost: 8080 install_repository_dependencies: True install_resolver_dependencies: True install_tool_dependencies: True tools:

bernt-matthias commented 3 years ago

Can you try to install manually in the Galaxy UI?

bernt-matthias commented 3 years ago

Duplicate of https://github.com/bgruening/galaxytools/issues/1124