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galaxyproject / tools-iuc

Tool Shed repositories maintained by the Intergalactic Utilities Commission
https://galaxyproject.org/iuc
MIT License
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Enhancement: Add in server indexed reference genomes to "basil Breakpoint detection, including large insertions" #6173

Closed jennaj closed 1 month ago

jennaj commented 1 month ago

toolshed.g2.bx.psu.edu/repos/iuc/basil/basil/1.2.0 https://toolshed.g2.bx.psu.edu/view/iuc/basil/e6ef29001647

The forum currently expects the reference genome to be a fasta in the history (only). This creates friction for people who used a server indexed reference in upstream steps. A toggle to choose between a server index or the history would be great.

bgruening commented 1 month ago

This should be fixed with the next update