SnpEff: distinguish between tool version and internal snpeff version …

galaxyproject / tools-iuc

Tool Shed repositories maintained by the Intergalactic Utilities Commission

https://galaxyproject.org/iuc

MIT License

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Closed wm75 closed 3 days ago

wm75 commented 3 days ago

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FOR CONTRIBUTOR:

[x] I have read the CONTRIBUTING.md document and this tool is appropriate for the tools-iuc repo.
[ ] License permits unrestricted use (educational + commercial)
[ ] This PR adds a new tool or tool collection
[x] This PR updates an existing tool or tool collection
[ ] This PR does something else (explain below)

wm75 commented 3 days ago

should fix #6571

No version bump because it seems reasonable to mask the broken version.

@bgruening @nsoranzo review welcome :-)

wm75 commented 3 days ago

The issue is that SnpEff databases state their version in the metadata like this:

so validating against the tool version makes no sense.

nsoranzo commented 3 days ago