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galaxyproject / training-material

A collection of Galaxy-related training material
https://training.galaxyproject.org
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RMSD, RMSF and PCA didn't work in the tutorial: Analysis of molecular dynamics simulations #3580

Closed biotemon closed 2 years ago

biotemon commented 2 years ago

The tutorial of the matter is:

https://training.galaxyproject.org/training-material/topics/computational-chemistry/tutorials/analysis-md-simulations/tutorial.html

The steps involving RMSD, RMSF and PCA are useless. They all end in the following error.

/corral4/main/jobs/045/151/45151780/tool_script.sh: line 9: Rscript: not found
Fatal error: Exit code 127 ()
bgruening commented 2 years ago

@biotemon which server are you using?

biotemon commented 2 years ago

usegalaxy.org doesn't have the tool, but I found it in usegalaxy.eu and cheminformatics.usegalaxy.eu