galaxyproject / training-material

A collection of Galaxy-related training material
https://training.galaxyproject.org
MIT License
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Simplify MSA generation steps in tutorials by using latest MAFFT version #4852

Closed wm75 closed 1 month ago

wm75 commented 1 month ago

The latest wrapper version of MAFFT allows generating MSAs of sequences from multiple input datasets.

This eliminates the need to concatenate those datasets as an extra step.

hexylena commented 1 month ago

Too bad this is already merged, I wanted to make an additional request: I'm assuming you've tested this in a galaxy somewhere, could you export that workflow for this tutorial while you're there?

wm75 commented 1 month ago

No worries, WFs for these are coming (pox tiled amplicon actually has a iwc version already), I just wasn't happy with a few steps yet (mafft being one of them) and updating WFs is much more work than updating tutorials.

hexylena commented 1 month ago

ah that's fantastic news, thanks @wm75.