Updated the workflow to change one of the inputs to Jbrowse.
It was using contigs.fasta as input where it should have been using the output from prokka (the fna file).
I edited the workflow in Galaxy, downloaded as a workflow.ga file, then copied that text to overwrite the existing workflow file in the repo. (For some reason couldn't directly upload the workflow.ga file).
The version of Jbrowse has also changed in the workflow.
I don't think these changes affect the existing workflow tests.
contigs.fasta
as input where it should have been using the output from prokka (thefna file
).workflow.ga
file, then copied that text to overwrite the existing workflow file in the repo. (For some reason couldn't directly upload theworkflow.ga
file).