Tutorials asking for love

[bebatut]

There is several tutorials that would need some ❤️ Most of the changes are newcomer-friendly 😄

We created a checklist of the possible contributions on the tutorials: https://galaxyproject.github.io/training-material/faq#how-can-i-get-started-with-contributing

• Galaxy Tips & Tricks
  • Data Manipulation
  • "Multisample Analysis"
    • Questions, Objectives, Key points
  • "Using dataset collection"
    • Tutorial content
    • Questions, Objectives, Key points
    • Remove direct link to data library #674
  • "Rule Based Uploader"
    • Tutorial content
    • Key points
  • User Interface and Features
  • "Understanding Galaxy history system"
    • Key points
• Galaxy for Scientists
  • Introduction to Galaxy Analyses
  • Options for using Galaxy
    • Objectives, key points
  • IGV Introduction
    • Tutorial content
    • Questions, Objectives, Key points
  • Introduction to Genomics and Galaxy
    • Add the trick from #753
  • Epigenetics
  • "HiCExplorer" #687
    • Objectives
    • Question boxes
  • DNA Methylation data analysis
    • Use bigwig instead of bedgraph #705
  • Genome Annotation
  • "Genome Annotation"
    • Tutorial content
    • Questions, Objectives, Key points
  • Proteomics
  • Peptide and Protein ID #847
  • Sequence analysis
  • Dive into QC
    • Add multiQC #85
    • Expand explanation
  • Dive into mapping
    • Expand explanation (SAM, BAM, etc)
  • "RAD-Seq Reference-based data analysis"
    • Key points
  • "RAD-Seq de-novo data analysis"
    • Key points
  • "RAD-Seq to construct genetic maps"
    • Key points
    • English #886
  • Transcriptomics
  • "Reference based"
    • Fix DEXSeq #544
  • De-novo transcriptome reconstruction with RNA-Seq #902
  • Variant analysis
  • "Calling very rare variants" #944
  • Exome sequencing data analysis #892
  • Calling variants in non-diploid systems
    • Remove direct link to data library #674
• Galaxy for Contributors and Instructors
• Galaxy for Developers and Admins
  • Admin
  • Galaxy Database schema
    • Tutorial content formatting
  • Dev
  • Galaxy from a developer point of view
    • Tutorial content
  • Tool Dependencies and Conda
    • Update fleeqtk #866
    • Some issues #397
  • Tool integration #428

[mblue9]

@bebatut I'm going to take a look at the RNA-seq ref-based tutorial, is the "Fix DEXSeq" point above this issue :https://github.com/galaxyproject/training-material/issues/544

[hexylena]

Cleaned up admin list a bit with now-fixed issues.