galaxyproteomics / tools-galaxyp

Galaxy Tool Shed repositories maintained and developed by the GalaxyP community
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Adding Lysine-D4 (deuterated lysine) as aa-modification in Proteomic tools #715

Closed qcsciphi closed 1 year ago

qcsciphi commented 1 year ago

Dear specialsts, Some SILAC proteomic datasets use Lysine-D4 (deuterated lysine) as modification. To be able to efficiently detect and correctly quantitate small peptides (6-30aa) in these datasets, may I kindly ask you to add "D4-Lys" modification to the exsisting list of modifications?

The tools involved are;

Chem properties of D4-Lys: https://www.thermofisher.com/order/catalog/product/88437 https://pubchem.ncbi.nlm.nih.gov/compound/L-Lysine-d4-_dihydrochloride

Thank you very much for your time and consideration. Kind regards, Serdar