The next release of OpenMS will include the SAGE search engine adapter. The data output of this engine can be processed (re-scoring) by both the percolator tool (already included in galaxyp) and mokapot. The latter re-scoring tool is becoming fashionable in proteomics.
@bernt-matthias has told me that he also thinks it would be interesting to have this tool in galaxy but I leave it to your consideration. Do you think you could include it in the next release, please?.
The next release of OpenMS will include the SAGE search engine adapter. The data output of this engine can be processed (re-scoring) by both the percolator tool (already included in galaxyp) and mokapot. The latter re-scoring tool is becoming fashionable in proteomics.
Here is the link: https://mokapot.readthedocs.io/en/latest/
@bernt-matthias has told me that he also thinks it would be interesting to have this tool in galaxy but I leave it to your consideration. Do you think you could include it in the next release, please?.
Thank you very much.
Best regards, Sergio