MNI subject key error, so how to AAL atlas or other MNI space ROIs?

gallantlab / pycortex

Pycortex is a python-based toolkit for surface visualization of fMRI data

https://gallantlab.github.io/pycortex

BSD 2-Clause "Simplified" License

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MNI subject key error, so how to AAL atlas or other MNI space ROIs? #327

Open willanxywc opened 5 years ago

willanxywc commented 5 years ago

Hi everyone~ I want to ouline the AAL atlas as suggested in #170, but when I tried vol = cortex.Volume('aal116MNI.nii.gz', subject='MNI', xfmname='identity') I got the MNI key error. I check the documentation, found usage like volume.random('MNI', 'identity') and it also didn't work. So MNI is no longer a pycortex subject? Then how to outline the AAL atlas or other MNI space ROIs?

KentZCLiang commented 2 years ago

Dear willanxywc, have you solved this problem?