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gamazonlab / MR-JTI

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How to produce *.db and covariance files using JTI #2

Closed YaCui closed 3 years ago

YaCui commented 3 years ago

Hi,

The training example of JTI in GitHub(JTI.r) cannot produce *.db and covariance files which are required by PrediXcan/MetaXcan. Could you please describe more about this?

Thanks, Ya

zdangm commented 3 years ago

Hi Ya, I updated the script for the predixcan (https://github.com/gamazonlab/MR-JTI/tree/master/model_training/predixcan) which provides an option for generating .db file. The process from weight file to .db file is the same for predixcan and JTI. I hope that will be helpful. Dan

YaCui commented 3 years ago

Thank you Dan!