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gauravsk / ranacapa

R package for downstream analysis for anacapa eDNA pipeline
https://f1000research.com/articles/7-1734/v1
GNU General Public License v3.0
22 stars 11 forks source link

some useful info for app deployment #21

Open gauravsk opened 6 years ago

gauravsk commented 6 years ago

Using this issue to keep track of things that help during app deployment.

options(repos = BiocInstaller::biocinstallRepos())

helps with bioconductor packages

gauravsk commented 6 years ago

also remember to install ranacapa from github before deploying so shinyapps knows where to look

gauravsk commented 5 years ago

Use this instead of the code in the top comment before deploying to source BioC packages:

options(repos = BiocManager::repositories())