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gavinha / TitanCNA

Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer
GNU General Public License v3.0
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Show segment be filtered by region width? #92

Open qindan2008 opened 3 years ago

qindan2008 commented 3 years ago

Hi, I run GATK CNV and then TitanCNA, according to the method https://github.com/gavinha/TitanCNA/issues/38. The result segment file "sampleID_cluster04.segs.txt" contains many region with width equals 1. So, should segment be filtered by region width? or by Length.snp.?

Thanks

HushWay commented 1 year ago

Hi, Have you solved the problem? I have the same doubts.