gbif-norway / helpdesk

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Request to update the survey field notes datasets published from NHMO #47

Open dagendresen opened 3 years ago

dagendresen commented 3 years ago

Request from Bjørn Petter to update the survey | field diary | field notes datasets ("kryssliste") published by NHMO.

Vascular plants field notes: https://doi.org/10.15468/w8gru5 (updated 2019-12-06) Fungi field notes: https://doi.org/10.15468/dx42gy (updated 2019-12-06) Lichen field notes: https://doi.org/10.15468/zrfxcu (updated 2020-01-06) Maybe this dataset also? https://doi.org/10.15468/tvnjk7 (updated 2019-10-29)

Are these pages with information on the field diary notes still up to date and relevant? Fungi field notes: http://www.nhm2.uio.no/botanisk/sopp/xlist.htm Lichen field notes: http://nhm2.uio.no/botanisk/lav/XLIST.HTM

For vascular plants field notes - see also: https://www.muspro.uio.no/fag/botanikk/karplanter2.shtml https://www.nhm.uio.no/forskning/samlinger/botanikk/karplanteherbariet/

Questions to explore: Where does the source data come from? Are the source data archived (stored?) somewhere that the IPT can fetch them from? Preferably as an automatic (daily?, weekly?, monthly?) routine?

rukayaj commented 3 years ago

Vascular plants field notes: https://doi.org/10.15468/w8gru5 (updated 2019-12-06) https://ipt.gbif.no/manage/resource.do?r=o_vxl 4 .txt files, xaa, xab, xac, xad

Fungi field notes: https://doi.org/10.15468/dx42gy (updated 2019-12-06) https://ipt.gbif.no/manage/resource?r=nxs Local mariadb database - nxs [sql] | db=NXS

Lichen field notes: https://doi.org/10.15468/zrfxcu (updated 2020-01-06) https://ipt.gbif.no/manage/resource?r=nxl 1 occurrence .txt file

Maybe Vascular Plants, Observations, Oslo (O) UiO also? https://doi.org/10.15468/tvnjk7 (updated 2019-10-29) https://ipt.gbif.no/manage/resource?r=o_v_gps Local mariadb database - o_v_gps [sql] | db= O_V_GPS

So the source data are a mix, either local maria db or uploaded text files. I have no idea where they came from originally but I see you have asked Bjørn Petter.

dagendresen commented 3 years ago

I believe that the MariaDB was only something Christian used for the IPT (for data quality testing routines and as the mechanism to trigger the IPT to reindex daily, weekly, etc) and thus not in any way the source data. I believe that vascular plant field notes source data was provided (as manual data export - maybe incremental as an explanation for the four data-files, xaa, xab, xac, xad) from Oddvar Pedersen and Lichen field notes from Einar Timdal and fungus field notes source data maybe from Anne Molina (?). [@ Bjørn Petter?]

dagendresen commented 3 years ago

Meeting with Olav and Oddvar on the "krysslister"

When: Wed 2021-09-15 10:00-12:00 Where: Tøyen: Lids - Konferanserom K29 (12)

rukayaj commented 3 years ago

This meeting was postponed

dagendresen commented 6 months ago

Update May 2024: Bjørn Petter writes that: Reidar Elven har krysslister som inneholder drøye 94 000 observasjoner. Dette er punchede data fra hans krysslister fra 1980 og ca. 2020. Ønsker disse integrert i eksisterende krysslister

Vascular plants field notes: https://doi.org/10.15468/w8gru5

Additional request to update the field notes portal (...) which was NOT developed by the GBIF-node and likely very hard to update from the GBIF node --> maybe possible to explore creating a hosted portal or something if useful...?

rukayaj commented 6 months ago

Yes i agree, definitely recommend a hosted portal for this! Or maybe Eirik should add it to https://samlingsportal.nhm.uio.no/museum/nhm/

Rindiser commented 6 months ago

I think the most important thing is to have a system for updating / correcting the data. As I remember Mikael have gotten the original dBase files for Oddvar so that he can transform them into a useful format. If we can get all the relevant information on the IPT then that would be a great first step. Make a portal to host the data might not be completely in line with our strategy, but that is something we can discuss.