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For capturing and discussing potential datasets suitable for publishing to GBIF
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Ag1000G phase 2 AR1 data release #290

Open gbif-portal opened 1 year ago

gbif-portal commented 1 year ago

Ag1000G phase 2 AR1 data release

Dataset link: https://www.malariagen.net/data/ag1000g-phase-2-ar1

Region: Africa

Taxon: Mosquitoes

Type: sampling event

Priority: medium

Bibliographic reference: The Anopheles gambiae 1000 Genomes Consortium (2017): Ag1000G phase 2 AR1 data release. MalariaGEN. http://www.malariagen.net/data/ag1000g-phase2-ar1

Comments: 'This data release includes genome-wide variant calls, haplotypes and associated data for 1,142 wild-caught specimens collected from 13 countries spanning sub-Saharan Africa, and 234 specimens comprising parents and progeny of 11 lab crosses.'

Dataholders contact information: Chris Clarkson (cc28@sanger.ac.uk)

Users contact info: kingenloff@gbif.org

CecSve commented 1 year ago

We may need to check up on whether GBIF want to publish full genome data. Currently it is only barcode, metabarcode and PCR based occurrences, right @dschigel?