gbouras13 / pharokka

fast phage annotation program
MIT License
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Replace `hmmscan` with `hmmsearch` #330

Open valentynbez opened 4 months ago

valentynbez commented 4 months ago

Description

hmmscan is slower than hmmsearch and might give false positive results, because p-value is corrected for the size of the HMM-database. In most applications using hmmsearch is advised.