Provide additional options to be given to Unicycler

gbouras13 / plassembler

Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates

MIT License

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Closed chen1i6c04 closed 7 months ago

chen1i6c04 commented 7 months ago

Is it possible to provide options for control unicycler? For some purpose, I hope can control some actions of unicycler.

e.g

plassembler run --unicycler_options " --no_rotate --spades_options --tmp-dir /tmp"

Thank you for the great tool

Best

gbouras13 commented 7 months ago

Hi @chen1i6c04,

Absolutely I will add this in the next v1.6.0 update.

George