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Question about -h parameter #13

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago 
Hello,

I have a question about the -h parameter. Let k=# trees stored in memory. 
According to the original paper, k= the expected number of recombination events 
in h bases (so, k is fixed along the sequence). However, the README suggests 
that k=the actual number of trees within the last h bases (so, k varies along 
the sequence, depending on how many recombination events actually occurred).

Could you clarify which is correct?

Thanks,
Jack Kamm

Original issue reported on code.google.com by jackk...@gmail.com on 18 Apr 2013 at 5:45

GoogleCodeExporter commented 9 years ago

Original comment by gche...@gmail.com on 2 May 2013 at 8:54