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ge11232002 / CNEr

Conserved Noncoding Elements (CNEs) Identification and Visualisation
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Error when running script #20

Open lorrainea opened 6 years ago

lorrainea commented 6 years ago

When running the attached script, I get the following error:

The number of axt files 1 The number of axt alignments is 50 Error in .setupMethodsTables(fdef, initialize = TRUE) : trying to get slot "group" from an object of a basic class ("NULL") with no slots Calls: readAxt ... .valid.Vector.length -> as -> .getMethodsTable -> .setupMethodsTables Execution halted

CNEr.txt

ge11232002 commented 6 years ago

Hi, I assume you ran into this error with the function "readAxt". Could you attach your seesionInfo(). Make sure you are using the latest Bioconductor with all packages updated.

lorrainea commented 6 years ago

Hi, so adding library(methods) to my script has managed to solve this error.