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Gemini Planet Imager Data Reduction Pipeline
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Measure Satellite Spot Flux primitive IDL error #113

Closed briley-lewis closed 3 years ago

briley-lewis commented 3 years ago

I was going through the GPI pol tutorial and encountered an error when trying to run the Measure Satellite Spot Flux primitive as part of the Simple Polarization Data Cube Extraction recipe for creating podc files. The error when setting verbose=1 in the primitive is:

Tag name SECONDORDER is undefined for structure <Anonymous> % Execution halted at: GPI_MEASURE_SATELLITE_SPOT_FLUX_POL 106

rjderosa commented 3 years ago

Thanks for the bug report! I reduced a random J-band polarimetry image from the archive and it got past this step without any error (I'm on revision c0cad3f). It might be related to the specific data you are using. If you could share the file name I could try again with the same file you are using to try to reproduce the error. A copy of the failed xml file from the Queue directory would be helpful, as well as a copy of the log in Reduced/logs.

briley-lewis commented 3 years ago

I just installed it last week, the last commit when I run git log is "515a74967a64423db203261e7f2635075f5de477" and there was no "failed" xml file produced it seems. Basically it froze up my computer and the whole pipeline interface once the primitive failed and I had to force quit everything. Logs are attached from the 2 days I tried it. I'm using the data set given in the pol tutorial: http://docs.planetimager.org/pipeline/usage/tutorial_pol.html

On Fri, Aug 7, 2020 at 7:58 AM Robert De Rosa notifications@github.com wrote:

Thanks for the bug report! I reduced a random J-band polarimetry image from the archive and it got past this step without any error (I'm on revision c0cad3f https://github.com/geminiplanetimager/gpi_pipeline/commit/c0cad3fb0766c944190d62a18a1f2f6676349d16). It might be related to the specific data you are using. If you could share the file name I could try again with the same file you are using to try to reproduce the error. A copy of the failed xml file from the Queue directory would be helpful, as well as a copy of the log in Reduced/logs.

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/geminiplanetimager/gpi_pipeline/issues/113#issuecomment-670559100, or unsubscribe https://github.com/notifications/unsubscribe-auth/ACSKFCU4YE4L2YCHELVFSY3R7QJDBANCNFSM4PXCQ7KQ .

briley-lewis commented 3 years ago

Logs are here! gpi_drp_200805.log gpi_drp_200804.log

rjderosa commented 3 years ago

Thanks for posting the logs. I don't see the failure here unfortunately. I did try reducing the tutorial data on my pipeline and things worked okay. Would you mind running the "rescan calib DB" and "rescan DRP config" and then trying the tutorial again? If it continues to crash could you share the newer log I can try to debug more.

briley-lewis commented 3 years ago

Yep, Pauline just messaged me and suggested trying rescan DRP config - that fixes it!

On Fri, Aug 7, 2020 at 11:31 AM Robert De Rosa notifications@github.com wrote:

Thanks for posting the logs. I don't see the failure here unfortunately. I did try reducing the tutorial data on my pipeline and things worked okay. Would you mind running the "rescan calib DB" and "rescan DRP config" and then trying the tutorial again? If it continues to crash could you share the newer log I can try to debug more.

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/geminiplanetimager/gpi_pipeline/issues/113#issuecomment-670651734, or unsubscribe https://github.com/notifications/unsubscribe-auth/ACSKFCUJEMMHNLJQSTNXQXLR7RCABANCNFSM4PXCQ7KQ .

rjderosa commented 3 years ago

Great!