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gencorefacility / reform

Modify existing reference fasta and gff3/gtf files to include a new sequence
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Handle uncompressed files #11

Closed YuWei-CH closed 4 months ago

YuWei-CH commented 4 months ago
  1. A gzip library is used to read ref_fasta and ref_gtf, and store the read results into a tempfile.
  2. To test the code, 2 new test cases based on case 2 and case 10 are added to test_data.
genericdata commented 4 months ago

You have 47 files changed. We don't understand why the test files are all altered. Just commit the 2 files and the 2 additoinal test data folders.