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gencorefacility / reform

Modify existing reference fasta and gff3/gtf files to include a new sequence
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Bug fix #20

Closed YuWei-CH closed 2 months ago

YuWei-CH commented 3 months ago
  1. Add a unique gene_id for test cases 14 and 15.
  2. Replace the chromosome name with chrom_id in in.gtf (or in.gff3).
  3. Convert GTF to GFF3, and vice versa, when the reference file has a different format than the insert file, and vice versa.