This PR fixes many broken tests; while skipping some.
The general error message is:
ERROR: test_check_if_in_gene (tests.unit.wqflask.snp_browser.test_snp_browser.TestSnpBrowser)
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Traceback (most recent call last):
File "/gnu/store/qv561pgnpmnw4n1l84jyi8r1bxy932b3-python-3.9.9/lib/python3.9/unittest/mock.py", line 1336, in patched
return func(*newargs, **newkeywargs)
File "/home/bonface/projects/genenetwork2/wqflask/tests/unit/wqflask/snp_browser/test_snp_browser.py", line 97, in test_check_if_in_gene
results_found = check_if_in_gene(
File "/home/bonface/projects/genenetwork2/wqflask/wqflask/snp_browser/snp_browser.py", line 928, in check_if_in_gene
result = g.db.execute(query).fetchone()
AttributeError: 'coroutine' object has no attribute 'fetchone'
which is some how caused by the "g.db" object. Ideally. we should deprecate the use this object. Attaching a database connection to the global context is bad!
Description
This PR fixes many broken tests; while skipping some.
The general error message is:
which is some how caused by the "g.db" object. Ideally. we should deprecate the use this object. Attaching a database connection to the global context is bad!
How should this be tested?
N/A
Any background context you want to provide?
N/A
What are the relevant pivotal tracker stories?
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Screenshots (if appropriate)
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Questions
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