geneontology / amigo

AmiGO is the public interface for the Gene Ontology.
http://amigo.geneontology.org
BSD 3-Clause "New" or "Revised" License
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Differences between intermediary and result pages (missing results, etc.) #554

Open lpalbou opened 5 years ago

lpalbou commented 5 years ago

In the following example, the number of results shown in the intermediary pages is not the same as on the result page (1 -> 0). We saw this behavior with Paul and Pascale a few months ago, not sure there is a ticket:

These fall under synonym related issues (in tracker regarding ids e.g. #120 #157 ) or upstream data issues: Some other genes can not be found: Searched on PRO id PR:000037245 : Search fails. This should retrieve mouse gene Cela2a, but it is not in the list of genes. (I guess PRO ids are not indexed in GOlr) Searched on UniProt id UniProtKB:P05208 : Search fails. This should find Cela2a (MGI:95316) (I am surprised that we are not able to find a mouse uniprot ID !)

kltm commented 5 years ago

I think this is a case where the perl-based filters are not adding something that became a default in the JS filters.