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geneontology / amigo

AmiGO is the public interface for the Gene Ontology.
http://amigo.geneontology.org
BSD 3-Clause "New" or "Revised" License
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UniProtKB IDs are showing up as source RNA central #567

Closed cmungall closed 5 years ago

cmungall commented 5 years ago

RNA central should never be of type protein:

image

E.g.

image

Clicking SALL3 here, we actually have the type correct here:

http://amigo.geneontology.org/amigo/gene_product/UniProtKB:Q9BXA9

cmungall commented 5 years ago

I'm perplexed as to how this is happening

the code here looks sound:

https://github.com/owlcollab/owltools/blob/452b4aa12665c79b94629d2e76b6b643a88e4537/OWLTools-Solr/src/main/java/owltools/solrj/GafSolrDocumentLoader.java#L240-L255

pgaudet commented 5 years ago

Sometimes AmiGO is a little erratic. I redid what I think you did and it seems OK

image
pgaudet commented 5 years ago

Hum no our queries are not the same.

cmungall commented 5 years ago

odd, I can't reproduce...

cmungall commented 5 years ago

odd, I can't reproduce...