General overview - Githubissues

geneontology / archive-reconstruction

Codes to move various legacy files to the current release.geneontology.org

BSD 3-Clause "New" or "Revised" License

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General overview #5

Closed lpalbou closed 3 years ago

lpalbou commented 4 years ago

Current data archive of GO is scattered across 3 ressources: SVN, CVS and archive.geneontology.org

GO data archive links:

svn: http://viewvc.geneontology.org/viewvc/GO-SVN/trunk/
archive: http://archive.geneontology.org
cvs: http://cvsweb.geneontology.org/

Archive retrieval:

[x] Get SVN copy: https://github.com/geneontology/operations/issues/35
[x] Get archive copy: https://github.com/geneontology/operations/issues/36
[x] Get CVS copy: https://github.com/geneontology/operations/issues/34

Archive reconstruction:

[x] reconstruction from SVN: https://github.com/geneontology/archive-reconstruction/issues/1
[x] reconstruction from archive: get sql dumps + possibly reconstruct obo files from obo-xml present since 2005) https://github.com/geneontology/archive-reconstruction/issues/6
[x] reconstruction from CVS: old OBOs GAFs are present here too https://github.com/geneontology/archive-reconstruction/issues/7
[ ] polishing: https://github.com/geneontology/archive-reconstruction/issues/8

lpalbou commented 3 years ago

Close in favor of https://github.com/geneontology/archive-reconstruction/issues/9