geneontology / go-annotation

This repository hosts the tracker for issues pertaining to GO annotations.
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amino acid metabolic process indirect for some #1804

Closed ValWood closed 3 years ago

ValWood commented 6 years ago

siroheme biosynthetic process/sulfate assimilation etc

O14172 SPAC4D7.06c met8 GO:0008652 UniProtKB-KW:KW-0028 P78937 SPBC27.08c sua1 GO:0008652 UniProtKB-KW:KW-0028 Q09878 SPCC584.01c SPCC584.01c GO:0008652 UniProtKB-KW:KW-0028 Q1K9C2 SPAC10F6.01c sir1 GO:0008652 UniProtKB-KW:KW-0028 Q9USP8 SPBC902.05c idh2 GO:0008652 UniProtKB-KW:KW-0028

and orthologs...

sylvainpoux commented 6 years ago

@marcfeuermann Marc, could you have a look when you have a moment? I suspect these KW should be removed from entries?

ValWood commented 4 years ago

Hi @marcfeuermann did you have time to look at these. I checked met8 and it still has the KW.

Cheers Val

marcfeuermann commented 3 years ago

Oups, this is an old story. Sorry for the delay, I've totally missed this one. I've removed the KW-0028 manually when it was possible. I've also contacted my colleagues propagating stuff via HAMAP annotation rules to update rule MF_03106 (https://hamap.expasy.org/rule/MF_03106) to remove the propagation of this KW.