geneontology / go-annotation

This repository hosts the tracker for issues pertaining to GO annotations.
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MAtrix (ILV5) amino acid metabolism/mitochondrial organization #2433

Closed ValWood closed 5 years ago

ValWood commented 5 years ago

ILV5 is described as Acetohydroxyacid reductoisomerase and mtDNA binding protein;

so do you think these are OK? or are they just downstream effects

From what I can see these are mainly GIs (supressors) https://www.yeastgenome.org/reference/S000127907 which would not be surprising that this was a long range phenotype. They don't appear to suggest a mechanism.

If you think it is OK, I can add an exception for this.

ValWood commented 5 years ago

also (this does seem to be indirect)

srengel commented 5 years ago

for ILV5, looks that that one may be bifunctional. different mutants cause loss of either the branched chain amino acid biosynthetic function or the mtDNA stability function. so i think we could leave those as is.

will look at KGD2...

ValWood commented 5 years ago

exception added for ILV5

srengel commented 5 years ago

i have removed the KGD2 annotation.