sarach06
commented
3 years ago Hi, Thank you very much. I have added the term to those entries. The changes will be available in the next InterPro release (86.0). I will have a look at that paper and the Pfam family. Regarding submission of annotations to Pfam (or any other related questions, information, etc) you can contact us through our helpdesk: http://pfam.xfam.org/help#tabview=tab17. Hope this helps. Best regards, Sara
http://www.ebi.ac.uk/interpro/entry/InterPro/IPR004992/
and it's two children
Also http://pfam.xfam.org/family/PF03319
This is a request to add a mapping, not report a problem one
Mappings should be added to
id: GO:0031469 name: polyhedral organelle namespace: cellular_component def: "An organelle found in bacteria consisting of a proteinaceous coat containing metabolic enzymes whose purpose is the sequestration or concentration of metabolites and which has the appearance of a polygonal granule by electron microscopy." [GOC:js, PMID:10498708, PMID:11844753, PMID:12923081] subset: goslim_pir synonym: "BAC" BROAD [] synonym: "bacterial microcompartment" EXACT [] is_a: GO:0043232 ! intracellular non-membrane-bounded organelle property_value: term_tracker_item https://github.com/geneontology/go-ontology/issues/16852 xsd:anyURI
See also #29
This paper from scientists at my institute includes a survey of previous work that used PF03319 https://www.biorxiv.org/content/10.1101/2021.01.25.427685v2
Note this group also came up with some new HMMs, I am not sure of the process of adding these to PFAM/IPR