geneontology / go-annotation

This repository hosts the tracker for issues pertaining to GO annotations.
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IPR006662 Thioredoxin-related #386

Closed gocentral closed 9 years ago

gocentral commented 17 years ago

IPR006662 Thioredoxin-related Please remove mapping to 'GO:0009055 electron carrier activity '. It laready has 'oxidoreductase'.

Thanks Pascale

Reported by: pgaudet

Original Ticket: "geneontology/annotation-issues/386":https://sourceforge.net/p/geneontology/annotation-issues/386

gocentral commented 17 years ago

Logged In: YES user_id=516865 Originator: NO

This appears to already have mappings to electron carrier activity, protein disulphide isomerase nd cell redox homeostasis:?

However, I'm not sure it should. Some other families (Pfam OST3/OST6 family members) pick up this mapping and there is no evidence that there are thioredoxins although they contain a thioredoxin fold.

....although actually this may be correct becasue the current EC mapping doesn't seem to be supported......

I'll monito this and see what Sandra thinks....

Original comment by: ValWood

gocentral commented 17 years ago

Original comment by: mah11

gocentral commented 17 years ago

Logged In: YES user_id=545117 Originator: NO

Actually, it shouldn't have oxidoreductase either. Both terms removed - I've left "cell redox homeostasis" for now.

Sandra

Original comment by: orchard

gocentral commented 17 years ago

Original comment by: orchard