Review annotations to GO:0009305 protein biotinylation & children

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Review annotations to GO:0009305 protein biotinylation & children #4101

Open pgaudet opened 2 years ago

pgaudet commented 2 years ago

As part of the project of removing single step BPs from the ontology (and moving them to MFs as appropriate), the proposal has been made to obsolete

GO:0009305 protein biotinylation & children:
GO:0071110 histone biotinylation
GO:0018054 peptidyl-lysine biotinylation There are 13 EXP annotations to these terms:

https://docs.google.com/spreadsheets/d/14SYbXbhrLgpgiOyIGXJh8AZRFbIrLITOeC67emKrfE8/edit#gid=0

Contributor (Assigned by)
CACAO 1 CAFA 1 CGD 2 FlyBase 4 MTBBASE 1 - Fixed SGD 2 - Fixed UniProt 2 - Fixed

marekskrzypek commented 2 years ago

CGD done

hattrill commented 2 years ago

FB done - i think - are we keeping "histone modification" as a process?

pgaudet commented 2 years ago

@colinlog said this wasn't useful; what do you think ?

I also wonder if we need 'post (or co)translational protein modification; looking at annotations, I think that the most informative way to capture the modifications are either as (1) processing/maturation, or (2) signaling. If we only know a protein is modified but we dont know why, I'd keep that as a MF only.

What do you think ?

Thanks, Pascale

hattrill commented 2 years ago

hi @pgaudet - I am happy to ditch it as it's not a super useful term!