PTN000124276 , DNA repair

geneontology / go-annotation

This repository hosts the tracker for issues pertaining to GO annotations.

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PTN000124276 , DNA repair #4950

Closed ValWood closed 6 months ago

ValWood commented 9 months ago

PTHR ID & PTN node:

GO:0006281 | DNA repair | IBA with PTN000124276 , S000001141

Sequences with problematic annotation (ID + gene/protein name):

https://www.pombase.org/gene/SPAC1F5.11c

Type of Issue: Erroneous source or erroneous propagation, or other issue

Annotation, should now be

GO:0140861 | DNA repair-dependent chromatin remodeling

@edwong57

Add the label 'high priority' if needed. Generally high priority issues affect a lot of proteins, and annotations are incorrect (as opposed to just imprecise).

pgaudet commented 9 months ago

I dont see the primary annotation in PAINT - did you just add that ?

ValWood commented 9 months ago

The annotation is not present yet, the existing EXP annotation would need revising at SGD I made the annotation at PomBase by IC from NuA4 histone acetyltransferase complex (GO:0035267)

I was looking at the intersection between DNA repair and GO:0140861 | DNA repair-dependent chromatin remodeling https://www.pombase.org/results/from/id/73947c3f-19dd-4dd4-880d-fc1e405e75b4 to check the annotations on the chromatin remodelling complexes. This was the only one remaining.

marcfeuermann commented 8 months ago

I removed DNA-repair. We will have to wait right terms to be available.

marcfeuermann commented 6 months ago

The term is now available from a Flybase annotation. Done.