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geneontology / go-annotation

This repository hosts the tracker for issues pertaining to GO annotations.
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PANTHER:PTHR12469:SF2 #5023

Open ValWood opened 9 months ago

ValWood commented 9 months ago

This is involved in succinate dehydrogenase complex assembly, not directly TCA cycle

UniProtKB:Q10440 | emi5 | involved_in | GO:0006099    tricarboxylic acid cycle | ECO:0007826   IEA | GO_REF:0000118 | PANTHER:PTHR12469:SF2 | 284812 Schizosaccharomyces pombe (strain 972 / ATCC 24843) |

@suzialeksander could you remove the IPI annotation at SGD, that seems to be the source. tks, v

ValWood commented 9 months ago

UniProtKB:Q10440 | emi5 | involved_in | GO:0006121    mitochondrial electron transport, succinate to ubiquinone | ECO:0000256   IEA | GO_REF:0000104 | UniRule:UR000369524 | 284812 Schizosaccharomyces pombe (strain 972 / ATCC 24843) | UniProt |  

UniRule:UR000369524 284812 Schizosaccharomyces pombe (strain 972 / ATCC 24843) UniProt UniProtKB:Q10440 emi5 involved_in GO:0006121 mitochondrial electron transport, succinate to ubiquinone [ECO:0007826]

also indirect

ValWood commented 1 month ago

@suzialeksander SDH5 still has tricarboxylic acid cycle |   | IPI with SDH1 | SGD | 2013-08-07 | Hao HX, et al. (2009) PMID:19628817

tricarboxylic acid cycle IPI with SDH1 SGD 2013-08-07 Hao HX, et al. (2009) PMID:19628817