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geneontology / go-annotation

This repository hosts the tracker for issues pertaining to GO annotations.
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Review annotations to GO:0042393 histone binding & children #5203

Open pgaudet opened 4 months ago

pgaudet commented 4 months ago

With @colinlog we would like to move these terms under GO:0140566 histone reader activity. See https://github.com/geneontology/go-ontology/issues/27427

This is to check whether existing annotations are consistent with this.

GO:0042393 histone binding GO:0070577 lysine-acetylated histone binding GO:0035064 methylated histone binding GO:0061628 H3K27me3 modified histone binding GO:0062072 H3K9me3 modified histone binding GO:1990889 H4K20me3 modified histone binding GO:0106153 phosphorylated histone binding

Annotations are here: https://docs.google.com/spreadsheets/d/1dq1uFZ4lpu9CVaMBNnY9OaGvuByHerJPoP_kd0q-ULc/edit#gid=0

RLovering commented 4 months ago

Hi I have reviewed all the UCL annotations in the spreadsheet. I am not sure how specific you want the reader terms to be so I have made suggestions and will leave you to decide what terms are required. Let me know when suitable reader terms are available and I will update P2G Best Ruth

suzialeksander commented 1 month ago

@pgaudet I think there are NTs needed but I don't see any NTR tickets

pgaudet commented 4 weeks ago

This is in progress, need to check with @colinlog if we want to create terms for each possible reader.