geneontology / go-annotation

This repository hosts the tracker for issues pertaining to GO annotations.
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GO:0009063 | amino acid catabolic process | IBA with PTN000480319 , locus:2176446 , P38117 #5320

Closed ValWood closed 4 months ago

ValWood commented 5 months ago

GO:0009063 | amino acid catabolic process | IBA with PTN000480319 , locus:2176446 , P38117

https://www.pombase.org/gene/SPAC1805.02c

source, this is the source of the human annotation, I don't get amino acid catabolic process from this? https://pubmed.ncbi.nlm.nih.gov/25416781/ " Because Lys200 and Lys203 are located adjacent to this ETFβ recognition loop, one may speculate that ETFβ methylation may differentially affect its interaction with the various mitochondrial dehydrogenases, thus providing a regulatory mechanism for modulating the metabolism of fatty acids, certain amino acids, and choline." (The useful thing to capture from this paper is that Recombinant METTL20 Catalyzes Methylation of Lys200 and Lys203 in ETFβ in Vitro)

is the closest I could not access the TAIR source

marcfeuermann commented 4 months ago

We have also the TAIR annotation from https://pubmed.ncbi.nlm.nih.gov/16923016/ It seems to be a phenotype, so I removed this annotation. We have some more relevant ones anyway.