Open raymond91125 opened 1 month ago
UCL done
RGD finished
I've deleted the annotation in EcoCyc but enteric bacteria can use D-glucuronosides as a carbon source so we require a catabolic process GO term. Is there a suggested replacement term for GO:0019391 glucuronoside catabolic process?
Hi @amandamackie
Do you have a paper describing this? just so we can add a reference. If the process exists we'll keep the term. Right now it looked liked just a post-translational modification.
Thanks, Pascale
Perhaps this MetaCyc https://biocyc.org/pathway?orgid=META&id=GLUCUROCAT-PWY is relevant.
This looks like a real pathway - right @rozaru ? maybe we should un-obsolete the term (sorry!) and describe the pathway more precisely- we can include start and end with the description in MetaCyc. And please add the MetaCyc xref.
Thanks, Pascale
MGI done.
Dear all,
The proposal has been made to obsolete GO:0019389 glucuronoside metabolic process GO:0019390 glucuronoside biosynthetic process GO:0019391 glucuronoside catabolic process
see https://github.com/geneontology/go-ontology/issues/28506. The biosynthetic and catabolic processes are MF's. Thus the metabolic process is unnecessary.
Experimental annotations that need to be reviewed are here: https://docs.google.com/spreadsheets/d/1E5TBXr3jK1m5UcSqnzHMFXVXUvqDYf6GaMFeymN-7g4/edit?gid=0#gid=0
Impacted groups: RGD 1 BHF-UCL 1 EcoCyc 1 MGI 1
** Group contacts: https://github.com/geneontology/go-site/blob/master/metadata/group-contacts.csv
Mappings that need to be reviewed: None.
Thanks.