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geneontology / go-annotation

This repository hosts the tracker for issues pertaining to GO annotations.
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Review annotations to GO:0008785 alkyl hydroperoxide reductase activity #5413

Open raymond91125 opened 2 months ago

raymond91125 commented 2 months ago

Dear all,

The proposal has been made to obsolete GO:0008785 alkyl hydroperoxide reductase activity (replaced by GO:0102039 NADH-dependent peroxiredoxin activity). see https://github.com/geneontology/go-ontology/issues/28340

Experimental annotations that need to be reviewed are here: https://docs.google.com/spreadsheets/d/17sxi9reMBLCOurJrwd1h20RNdqeXBmdrBNJA_5paX8k/edit?gid=0#gid=0

Impacted groups: EcoliWiki 1 MTBBASE 1 (automatic transfer) PseudoCAP 1 UniProt 1 (automatic transfer)

** Group contacts: https://github.com/geneontology/go-site/blob/master/metadata/group-contacts.csv

Mappings that need to be reviewed: (InterPro2GO, UniProt-Keywords, UniRule) HAMAP:MF_01676 > GO:alkyl hydroperoxide reductase activity ; GO:0008785 InterPro:IPR012081 Alkyl hydroperoxide reductase subunit F > GO:alkyl hydroperoxide reductase activity ; GO:0008785 UniRule:UR000084072 > GO:alkyl hydroperoxide reductase activity ; GO:0008785 Reactome:R-HSA-1222526 > GO:alkyl hydroperoxide reductase activity ; GO:0008785

Thanks.

deustp01 commented 2 months ago

Reactome (1 instance) is fixed.

sarach06 commented 2 months ago

Hi , Thank you very much for this. I have replaced the term in IPR012081 which will be visible in the next InterPro release (102.0).

Best, Sara