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geneontology / go-annotation

This repository hosts the tracker for issues pertaining to GO annotations.
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IPR various/ cell wall taxon violations #724

Closed gocentral closed 9 years ago

gocentral commented 15 years ago

There are a number of interpro domains ampping to cell wall processes from higher eukaryotes

I'm not sure whaich specific child terms they are attached to, but I'm seeing them annotated to the term

"cell wall organization or biogenesis" in a slim

They include IPR002152 IPR018392 IPR002482 IPR000974

val

Reported by: ValWood

Original Ticket: geneontology/annotation-issues/724

gocentral commented 15 years ago

mappings: InterPro:IPR002152 Glycoside hydrolase, family 23 > GO:lysozyme activity ; GO:0003796 InterPro:IPR002152 Glycoside hydrolase, family 23 > GO:peptidoglycan catabolic process ; GO:0009253 InterPro:IPR002152 Glycoside hydrolase, family 23 > GO:cell wall macromolecule catabolic process ; GO:0016998

InterPro:IPR018392 Peptidoglycan-binding lysin domain > GO:cell wall macromolecule catabolic process ; GO:0016998

InterPro:IPR002482 Peptidoglycan-binding Lysin subgroup > GO:cell wall macromolecule catabolic process ; GO:0016998

InterPro:IPR000974 Glycoside hydrolase, family 22, lysozyme > GO:lysozyme activity ; GO:0003796 InterPro:IPR000974 Glycoside hydrolase, family 22, lysozyme > GO:cell wall macromolecule catabolic process ; GO:0016998

Original comment by: mah11

gocentral commented 15 years ago

Original comment by: mah11

gocentral commented 14 years ago

Original comment by: dmlonsdale

gocentral commented 13 years ago

Hi,

We've noticed that this item is still open, even though it's over six months old. Has the issue been resolved (forgetting to close out the item), or is there still work to do on it?

Thanks!

Original comment by: mah11

gocentral commented 13 years ago

Original comment by: dmlonsdale

gocentral commented 13 years ago

Original comment by: sarahburge