geneontology / go-announcements

Announcements related to ontology changes that may impact groups using GO, such as obsoletions, merges, etc.
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Obsoletion notice: GO:0102053 (-)-jasmonoyl-isoleucine synthetase activity and GO:0102057 jasmonoyl-valine synthetase activity #635

Closed pgaudet closed 9 months ago

pgaudet commented 9 months ago

Dear all,

The proposal has been made to obsolete GO:0102053 (-)-jasmonoyl-isoleucine synthetase activity GO:0102057 jasmonoyl-valine synthetase activity & replace by GO:0102058 jasmonoyl-leucine synthetase activity The reason for obsoletion is that in EC and RHEA, these are represented by a single reaction: RHEA:55772 and EC 6.3.2.52 These cross references are present on GO:0102057 and GO:0102058 but missing from GO:0102053. All 3 terms are annotated to the same 4 genes by UniProt; no reannotation is needed. I will • obsolete GO:0102053 & GO:0102057, and replaced them by GO:0102058 jasmonoyl-leucine synthetase activity. • rename GO:0102058 to the more general 'jasmonoyl-L-amino acid ligase activity' • change the definition to match RHEA. You can comment on the ticket: https://github.com/geneontology/go-ontology/issues/26578

Thanks, Pascale