geneontology / go-announcements

Announcements related to ontology changes that may impact groups using GO, such as obsoletions, merges, etc.
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Obsoletion notice: some 'entry into host cell' terms #647

Closed pgaudet closed 8 months ago

pgaudet commented 8 months ago

Dear all,

The proposal has been made to obsolete the following 'entry into host cell' terms: GO:0039667 viral entry into host cell via pilus retraction > Replace by GO:0039666 virion attachment to host cell pilus GO:0039668 viral entry into host cell via pilus basal pore > Replace by GO:0039666 virion attachment to host cell pilus GO:0039669 viral entry into host cell via pilus retraction and membrane fusion > Replace by GO:0039666 virion attachment to host cell pilus GO:0035635 entry of bacterium into host cell > replace by GO:0046718 symbiont entry into host cell GO:0039707 virus-mediated pore formation in host cell membrane > replace by GO:0044694 symbiont entry into host cell via pore formation in plasma membrane

There are 16 EXP annotations, 2 Reactome mappings, 6 InterPro and 1 HAMAP mapping, see https://github.com/geneontology/go-annotation/issues/4882

Impacted groups: Database Count
AgBase 4
CACAO 1
GO_Central 1
MGI 2
CAFA 4
UniProt 2
 Reactome 2
 InterPro 6
 HAMAP 1

You can comment on the ticket: https://github.com/geneontology/go-ontology/issues/26669

Thanks, Pascale