geneontology / go-announcements

Announcements related to ontology changes that may impact groups using GO, such as obsoletions, merges, etc.
12 stars 1 forks source link

Obsoletion notice: ncRNA terms GO:0110008 GO:0097064 GO:0034660 GO:0034470 GO:0098781 GO:0071029 GO:0071046 #708

Closed ValWood closed 2 months ago

ValWood commented 3 months ago

Dear all,

The proposal has been made to obsolete

GO:0034471 ncRNA 5'-end processing No direct annotations (children have been rehoused) GO;0034661 ncRNA catabolic process No direct annotations (children will be rehoused) GO:0110008 ncRNA deadenylation GO:0097064 ncRNA export from nucleus GO:0034660 ncRNA metabolic process GO:0034470 ncRNA processing GO:0098781 ncRNA transcription GO:0071029 nuclear ncRNA surveillance GO:0071046 nuclear polyadenylation dependent ncRNA catabolic process

Annotations: There are 24 experimental annotations to these term by:

2 BHF-UCL GO:0110008 @RLovering 1 EcoCyc GO:0034470 @keseler 3 MGI GO:0098781 @LiNiMGI 1 PomBase GO:0034470 @ValWood 2 PomBase GO:0071029 @ValWood 3 PomBase GO:0071046 @ValWood 2 SGD GO:0097064 @suzialeksander 2 SGD GO:0098781 @suzialeksander 2 TAIR GO:0034470 @lreiser 2 UniProt GO:0034470 @Antonialock 1 WB GO:0034470 @vanaukenk 2 WB GO:0034660 @vanaukenk

There are 1 InterPro2GO/UniRule/UniProtKW mappings to this term.

This term is not present in any subset.

Annotations can be viewed here: https://github.com/geneontology/go-annotation/issues/5124.

If obsolete term has a 'consider' term: (optional)

Consider annotating to the specific type of ncRNA

Any comments can be added to the issue: https://github.com/geneontology/go-ontology/issues/26761 Unless objections are received by [10-10-24], we will assume that you agree to this change.

Thanks,

The GO-Ontology Editors