geneontology / go-announcements

Announcements related to ontology changes that may impact groups using GO, such as obsoletions, merges, etc.
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Obsoletion notice: alcohol dehydrogenase (NAD+) activity with co-factor specificity #815

Closed pgaudet closed 13 hours ago

pgaudet commented 4 months ago

Dear all,

The reason has been made to obsolete GO:0004023 alcohol dehydrogenase (NAD+) activity, metal ion-independent GO:0004025 alcohol dehydrogenase (NAD+) activity, iron-dependent GO:0004024 alcohol dehydrogenase (NAD+) activity, zinc-dependent

The reason for obsoletion is that the co-factor is outside the scope of GO. Note that this is also outside the scope of EC and RHEA. There are 8 annotations to these terms: by Reactome, EcoCyc, EcoWiki (as well as MGI and UniProt, that will be automatically replaced). The terms will be replaced by the parent GO:0004022 alcohol dehydrogenase (NAD+) activity.

Annotations are here: https://github.com/geneontology/go-annotation/issues/5358

You can comment on the ticket: https://github.com/geneontology/go-ontology/issues/28393

Thanks, Pascale