Open kimrutherford opened 4 months ago
I replicated this locally today; looking into it.
Hi. Has there been any progress on this issue? We'd like to use this API to update PomBase with the pombe GO-CAM details.
Thanks!
@kimrutherford Unfortunately, there has not been much progress here with meetings and some other things that have come up. This is still in the queue though.
Also see https://github.com/geneontology/noctua/issues/895#issuecomment-2167022756
Hi. I just tried this:
curl -X 'GET' \
'https://api.geneontology.org/api/taxon/NCBITaxon%3A4896/models' \
-H 'accept: application/json'
but got "Internal Server Error" after 60 seconds.
Thanks for the report @kimrutherford - I still need to deploy the fix to the API server :)
Hi @sierra-moxon
I'm still getting the "Internal Server Error". We'd like to use this endpoint for getting GO-CAMs details for PomBase.
Hi.
Sorry to bother you again about this. The API was working yesterday but today it's back to giving "Internal Server Error":
> time curl -X 'GET' \
'https://api.geneontology.org/api/taxon/NCBITaxon%3A4896/models' \
-H 'accept: application/json'
gives:
Internal Server Error
real 1:01.14
user 0.021
sys 0.007
maxmem 13 MB
faults 0
It always takes 60 seconds to fail.
Oddly, the API calls that succeeded yesterday also took 60 seconds.
@kimrutherford - no bother at all - I am hacking away at getting the fixes for these deployed. will take a look here.
Hi.
I'm getting an Internal Server Error from
/api/taxon/{taxon}/models
when looking up NCBITaxon:4896 (pombe).I tried on the webpage and with curl:
The error is returned after 60 seconds.