geneontology / go-ontology

Source ontology files for the Gene Ontology
http://geneontology.org/page/download-ontology
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taxon restriction for retinol related terms for yeast #10578

Closed gocentral closed 9 years ago

gocentral commented 10 years ago

for example etinyl-palmitate esterase activity https://sourceforge.net/p/geneontology/annotation-issues/1096/

but i think anything which refers to retinol?

Reported by: ValWood

Original Ticket: geneontology/ontology-requests/10383

gocentral commented 10 years ago

Diff:


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 for example
 etinyl-palmitate esterase activity 
 https://sourceforge.net/p/geneontology/annotation-issues/1096/

Original comment by: rebeccafoulger

gocentral commented 10 years ago

Original comment by: rebeccafoulger

gocentral commented 10 years ago

Added 'only in Metazoa' taxon restriction to retinol/vitamin A terms: retinoid metabolic process ; GO:0001523 response to vitamin A ; GO:0033189 retinoid binding ; GO:0005501 retinol transport ; GO:0034633 vitamin A transport ; GO:0071938

And created P/F links for retinol enzyme terms (including retinyl-palmitate esterase activity), so taxon restriction will filter down. The metabolism push coming up, and the Rhea mappings will allow more P/F enzyme links to be made automatically, but let me know if you see any more retinol ones that need adding in the meantime.

Becky

Original comment by: rebeccafoulger