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Source ontology files for the Gene Ontology
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definition for oxidoreductase activity, acting on CH-OH... #1122

Closed gocentral closed 9 years ago

gocentral commented 21 years ago

Making a definition for -%oxidoreductase activity, acting on CH-OH group of donors ; GO:0016614

%oxidoreductase activity ; GO:0016491 -%oxidoreductase activity, acting on CH-OH group of donors ; GO:0016614

%oxidoreductase activity ; GO:0016491 def: Catalysis of oxidation-reduction (redox) reactions. Oxidoreductase is the systematic name for any enzyme of class EC 1, which comprises dehydrogenases, hydroxylases, oxidases, and reductases.

-%oxidoreductase activity, acting on CH-OH group of donors ; GO:0016614 def:

Reported by: jenclark

Original Ticket: "geneontology/ontology-requests/1125":https://sourceforge.net/p/geneontology/ontology-requests/1125

gocentral commented 21 years ago

Logged In: YES user_id=735846

Making a definition for -%oxidoreductase activity, acting on CH-OH group of donors ; GO:0016614

%oxidoreductase activity ; GO:0016491 -%oxidoreductase activity, acting on CH-OH group of donors ; GO:0016614

%oxidoreductase activity ; GO:0016491 def: Catalysis of oxidation-reduction (redox) reactions. Oxidoreductase is the systematic name for any enzyme of class EC 1, which comprises dehydrogenases, hydroxylases, oxidases, and reductases.

Writing the definition:

-%oxidoreductase activity, acting on CH-OH group of donors ; GO:0016614 def: Catalysis of oxidation-reduction (redox) reactions, acting on CH- OH group of donors. 'Oxidoreductase, acting on CH-OH group of donors' is the systematic name for any enzyme of class EC 1.1.

Acceptors may include: NAD or NADP as acceptor cytochrome as acceptor oxygen as acceptor disulfide as acceptor quinone or similar compound as acceptor other acceptors in EC 1.1.99

http://www.chem.qmul.ac.uk/iubmb/enzyme/EC1/1/

Original comment by: jenclark

gocentral commented 21 years ago

Original comment by: girlwithglasses

gocentral commented 21 years ago

Original comment by: girlwithglasses

gocentral commented 21 years ago

Logged In: YES user_id=473796

After discussion within the EBI GO group, we've changed the def for oxidoreductase activity to "Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced."

Child term defs can be derived from this.

Original comment by: girlwithglasses