Open ValWood opened 4 years ago
@colinlog @RLovering @pgaudet
(Colin I did not mail your contact , because I'm no longer sure what the question is)
close?
I changed the label and removed the logical definition in this ticket #19313 GO:0000120 RNA polymerase I transcription factor complex -> RNA polymerase I transcription regulator complex ** Remove LD: 'protein-containing complex' and ('capable of' some 'regulation of transcription by RNA polymerase I')
I think that takes care of this one.
Thanks, Pascale
RNA polymerase I core factor complex (GO:0070860) is_a GO:0000120 so this becomes a "RNA polymerase I transcription regulator complex" but these are GTFs. Is that OK?
~Isn't RNA polymerase I core factor complex a RNA polymerase ?~
OK never mind !
I think it's a GTF? https://www.pombase.org/term/GO:0070860
GO:0000120 RNA polymerase I transcription factor complex A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase I.
I have
and to the 2 descendants?
rrn11 , rrn6 , rrn7
acr1 , rrn10 , rrn5 , spp27
which are all also
An activity that contributes to transcription start site selection and transcription initiation of genes transcribed by RNA polymerase I. Factors required for RNA polymerase I transcription initiation include upstream activation factor (UAF), core factor (CF), TATA binding protein (TBP) and RRN3.
https://www.pombase.org/term/GO:0001181
so perhaps the def of GO:0000120 RNA polymerase I transcription factor complex A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase I.
could be
GO:0000120 RNA polymerase I transcription factor complex A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase I. Members include upstream activation factor (UAF), core factor (CF), TATA binding protein (TBP) and RRN3.
Then we need to figure out how this relates to GO:0005668: 'RNA polymerase transcription factor SL1 complex'