geneontology / go-ontology

Source ontology files for the Gene Ontology
http://geneontology.org/page/download-ontology
Creative Commons Attribution 4.0 International
220 stars 40 forks source link

GO:0062039 biofilm matrix NOT an extracellular matrix ?? #22176

Open pgaudet opened 3 years ago

pgaudet commented 3 years ago

Reported as a taxon constraint prediction inconsistency https://github.com/geneontology/go-ontology/issues/16298#issuecomment-921962141

GO:0030312 We propose to move GO:0062039 biofilm matrix up to GO:0030312 external encapsulating structure

Note that there are few direct annotations to ECM to organisms other than animals.

Alternatively, we could create a new term to describe the animal ECM, and keep the current ECM as a grouping term.

@RLovering @mgiglio99 @tberardini

tberardini commented 3 years ago

Alternatively, we could create a new term to describe the animal ECM, and keep the current ECM as a grouping term.

I like this option.