search

geneontology / go-ontology

Source ontology files for the Gene Ontology
http://geneontology.org/page/download-ontology
Creative Commons Attribution 4.0 International
220 stars 40 forks source link

create report: Metacyc xrefs in ontology that are not in Rhea #27102

Closed balhoff closed 3 months ago

balhoff commented 7 months ago

We are considering importing these mappings fully from Rhea. It would be useful to know which mappings are in the ontology that we wouldn't get if we just import from Rhea.

sjm41 commented 7 months ago

Hi @balhoff It's probably obvious, but this query should be restricted to MF, as we also have lots of MetaCyc xrefs to pathways (BPs) that we want to keep but won't get from Rhea.

pgaudet commented 7 months ago

good point !

balhoff commented 6 months ago

The Rhea to xref mapping file has both the directional and the master Rhea ID on each line. For this report I matched on the master ID, since we use that in GO. It looks like we have 1669 GO-to-MetaCyc xrefs that Rhea does not provide (out of 5333 total in GO, for molecular functions):

GO:0000048  PEPTIDYLTRANSFERASE-RXN
GO:0000213  3.1.27.9-RXN
GO:0000224  3.5.1.52-RXN
GO:0000334  1.13.11.6-RXN
GO:0000823  2.7.1.151-RXN
GO:0000825  RXN-7184
GO:0001665  2.4.99.3-RXN
GO:0001681  RXN-13181
GO:0001681  RXN-13182
GO:0001758  RETINAL-DEHYDROGENASE-RXN
GO:0002935  RXN0-7007
GO:0003724  RXN-11109
GO:0003756  5.3.4.1-RXN
GO:0003796  3.2.1.17-RXN
GO:0003829  2.4.1.102-RXN
GO:0003835  RXN-18268
GO:0003836  2.4.99.4-RXN
GO:0003840  GAMMA-GLUTAMYLTRANSFERASE-RXN
GO:0003844  GLYCOGEN-BRANCH-RXN
GO:0003845  11-BETA-HYDROXYSTEROID-DEHYDROGENASE-RXN
GO:0003853  2-METHYLACYL-COA-DEHYDROGENASE-RXN
GO:0003860  3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN
GO:0003861  3-ISOPROPYLMALISOM-RXN
GO:0003862  3-ISOPROPYLMALDEHYDROG-RXN
GO:0003865  1.3.99.5-RXN
GO:0003875  ADP-RIBOSYLARGININE-HYDROLASE-RXN
GO:0003878  PWY-5172
GO:0003887  DNA-DIRECTED-DNA-POLYMERASE-RXN
GO:0003899  DNA-DIRECTED-RNA-POLYMERASE-RXN
GO:0003904  DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN
GO:0003905  3.2.2.21-RXN
GO:0003910  DNA-LIGASE-ATP-RXN
GO:0003911  DNA-LIGASE-NAD+-RXN
GO:0003912  DNA-NUCLEOTIDYLEXOTRANSFERASE-RXN
GO:0003913  DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN
GO:0003914  RXN-10771
GO:0003917  5.99.1.2-RXN
GO:0003918  5.99.1.3-RXN
GO:0003940  3.2.1.76-RXN
GO:0003943  3.1.6.12-RXN
GO:0003944  3.1.4.45-RXN
GO:0003950  NAD+-ADP-RIBOSYLTRANSFERASE-RXN
GO:0003953  RXN-13859
GO:0003955  NQOR-RXN
GO:0003957  PYRNUTRANSHYDROGEN-RXN
GO:0003964  RNA-DIRECTED-DNA-POLYMERASE-RXN
GO:0003968  RNA-DIRECTED-RNA-POLYMERASE-RXN
GO:0003972  RNA-LIGASE-ATP-RXN
GO:0003973  RXN-969
GO:0003993  ACID-PHOSPHATASE-RXN
GO:0004022  ALCOHOL-DEHYDROG-GENERIC-RXN
GO:0004030  ALDEHYDE-DEHYDROGENASE-NADP+-RXN
GO:0004031  RETINAL-OXIDASE-RXN
GO:0004035  ALKAPHOSPHA-RXN
GO:0004050  APYRASE-RXN
GO:0004051  ARACHIDONATE-5-LIPOXYGENASE-RXN
GO:0004058  AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN
GO:0004063  ARYLDIALKYLPHOSPHATASE-RXN
GO:0004068  PWY-5155
GO:0004074  BILIVERDIN-REDUCTASE-RXN
GO:0004097  RXN-13061
GO:0004098  CEREBROSIDE-SULFATASE-RXN
GO:0004108  CITSYN-RXN
GO:0004134  AMYLOMALT-RXN
GO:0004134  RXN-1828
GO:0004134  RXN-9023
GO:0004135  3.2.1.33-RXN
GO:0004145  DIAMACTRANS-RXN
GO:0004155  1.5.1.34-RXN
GO:0004159  DIHYDROURACIL-DEHYDROGENASE-NAD+-RXN
GO:0004160  DIHYDROXYISOVALDEHYDRAT-RXN
GO:0004169  2.4.1.109-RXN
GO:0004177  3.4.11.21-RXN
GO:0004177  3.4.11.5-RXN
GO:0004177  3.4.11.6-RXN
GO:0004177  3.4.11.9-RXN
GO:0004177  RXN0-5052
GO:0004178  3.4.11.1-RXN
GO:0004179  3.4.11.2-RXN
GO:0004180  3.4.17.11-RXN
GO:0004181  3.4.17.17-RXN
GO:0004181  ALANINE-CARBOXYPEPTIDASE-RXN
GO:0004181  CARBOXYPEPTIDASE-A-RXN
GO:0004181  GLY-X-CARBOXYPEPTIDASE-RXN
GO:0004181  LYSINEARGININE-CARBOXYPEPTIDASE-RXN
GO:0004185  3.4.16.2-RXN
GO:0004185  3.4.16.5-RXN
GO:0004190  3.4.23.1-RXN
GO:0004190  3.4.23.15-RXN
GO:0004190  3.4.23.20-RXN
GO:0004190  3.4.23.25-RXN
GO:0004190  3.4.23.32-RXN
GO:0004190  3.4.23.34-RXN
GO:0004190  3.4.23.35-RXN
GO:0004190  3.4.23.4-RXN
GO:0004190  3.4.23.43-RXN
GO:0004190  3.4.23.5-RXN
GO:0004197  3.4.22.1-RXN
GO:0004197  3.4.22.14-RXN
GO:0004197  3.4.22.15-RXN
GO:0004197  3.4.22.16-RXN
GO:0004197  3.4.22.27-RXN
GO:0004197  3.4.22.34-RXN
GO:0004197  3.4.22.38-RXN
GO:0004197  3.4.22.40-RXN
GO:0004197  3.4.22.41-RXN
GO:0004214  3.4.14.1-RXN
GO:0004219  PYROGLUTAMYL-PEPTIDASE-I-RXN
GO:0004221  UBIQUITIN-THIOLESTERASE-RXN
GO:0004222  3.4.24.11-RXN
GO:0004222  3.4.24.14-RXN
GO:0004222  3.4.24.17-RXN
GO:0004222  3.4.24.18-RXN
GO:0004222  3.4.24.19-RXN
GO:0004222  3.4.24.21-RXN
GO:0004222  3.4.24.22-RXN
GO:0004222  3.4.24.23-RXN
GO:0004222  3.4.24.24-RXN
GO:0004222  3.4.24.35-RXN
GO:0004222  3.4.24.37-RXN
GO:0004222  3.4.24.55-RXN
GO:0004222  3.4.24.56-RXN
GO:0004222  3.4.24.57-RXN
GO:0004222  3.4.24.59-RXN
GO:0004222  3.4.24.61-RXN
GO:0004222  3.4.24.64-RXN
GO:0004222  3.4.24.69-RXN
GO:0004222  3.4.24.70-RXN
GO:0004222  3.4.24.71-RXN
GO:0004222  3.4.24.72-RXN
GO:0004230  3.4.11.7-RXN
GO:0004234  3.4.24.65-RXN
GO:0004237  3.4.13.19-RXN
GO:0004239  3.4.11.18-RXN
GO:0004246  3.4.15.1-RXN
GO:0004250  3.4.11.22-RXN
GO:0004251  3.4.13.9-RXN
GO:0004252  ACYLAMINOACYL-PEPTIDASE-RXN
GO:0004274  3.4.14.5-RXN
GO:0004294  3.4.14.10-RXN
GO:0004300  RXN-10697
GO:0004300  RXN-10704
GO:0004300  RXN-10705
GO:0004308  3.2.1.18-RXN
GO:0004310  RXN-12263
GO:0004314  MALONYL-COA-ACP-TRANSACYL-RXN
GO:0004315  2.3.1.179-RXN
GO:0004316  RXN-10659
GO:0004316  RXN-11476
GO:0004316  RXN-11480
GO:0004319  ENOYL-ACP-REDUCT-NADPH-RXN
GO:0004320  3.1.2.14-RXN
GO:0004338  3.2.1.58-RXN
GO:0004339  3.2.1.3-RXN
GO:0004353  GLUTAMATE-DEHYDROGENASE-NADP+-RXN
GO:0004353  GLUTAMATE-SYN2-PWY
GO:0004354  GLUTSYNIII-PWY
GO:0004355  GLUGLNSYN-PWY
GO:0004355  GLUTSYN-PWY
GO:0004364  GSHTRAN-RXN
GO:0004399  HISTALDEHYD-RXN
GO:0004399  HISTOLDEHYD-RXN
GO:0004415  3.2.1.35-RXN
GO:0004423  3.1.6.13-RXN
GO:0004446  RXN-7920
GO:0004449  ISOCITRATE-DEHYDROGENASE-NAD+-RXN
GO:0004467  PWY-5143
GO:0004482  MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN
GO:0004483  2.1.1.57-RXN
GO:0004484  MRNA-GUANYLYLTRANSFERASE-RXN
GO:0004489  1.5.1.20-RXN
GO:0004508  STEROID-17-ALPHA-MONOOXYGENASE-RXN
GO:0004522  3.1.27.5-RXN
GO:0004523  3.1.26.4-RXN
GO:0004525  3.1.26.3-RXN
GO:0004526  3.1.26.5-RXN
GO:0004528  3.1.4.1-RXN
GO:0004530  3.1.21.1-RXN
GO:0004531  3.1.22.1-RXN
GO:0004533  3.1.13.2-RXN
GO:0004535  3.1.13.4-RXN
GO:0004550  NUCLEOSIDE-DIP-KIN-RXN
GO:0004551  NUCLEOTIDE-PYROPHOSPHATASE-RXN
GO:0004556  ALPHA-AMYL-RXN
GO:0004556  RXN-1823
GO:0004556  RXN-1825
GO:0004556  RXN0-5181
GO:0004558  MALTODEXGLUCOSID-RXN
GO:0004559  3.2.1.24-RXN
GO:0004561  3.2.1.50-RXN
GO:0004563  3.2.1.52-RXN
GO:0004564  RXN-9985
GO:0004565  3.2.1.23-RXN
GO:0004565  BGALACT-PWY
GO:0004567  3.2.1.25-RXN
GO:0004568  3.2.1.14-RXN
GO:0004571  RXN-18910
GO:0004571  RXN-18911
GO:0004574  3.2.1.10-RXN
GO:0004583  RXN-5472
GO:0004584  2.4.1.130-RXN
GO:0004623  RXN-15065
GO:0004623  RXN-15067
GO:0004645  RXN-1826
GO:0004650  RXN-2103
GO:0004651  RXN-21861
GO:0004653  2.4.1.41-RXN
GO:0004662  RXN-3701
GO:0004663  RXN-19995
GO:0004663  RXN-19996
GO:0004663  RXN-19997
GO:0004665  PREPHENATE-DEHYDROGENASE-NADP+-RXN
GO:0004673  2.7.13.3-RXN
GO:0004674  PROTEIN-KINASE-RXN
GO:0004689  2.7.11.19-RXN
GO:0004707  2.7.11.24-RXN
GO:0004708  2.7.12.2-RXN
GO:0004709  2.7.11.25-RXN
GO:0004714  2.7.10.1-RXN
GO:0004715  2.7.10.1-RXN
GO:0004743  PEPDEPHOS-RXN
GO:0004744  RETINAL-ISOMERASE-RXN
GO:0004749  PWY0-662
GO:0004806  TRIACYLGLYCEROL-LIPASE-RXN
GO:0004833  TRYPTOPHAN-23-DIOXYGENASE-RXN
GO:0004851  UROPORIIIMETHYLTRANSA-RXN
GO:0005260  3.6.3.49-RXN
GO:0008106  ALCOHOL-DEHYDROGENASE-NADP+-RXN
GO:0008107  GALACTOSIDE-2-L-FUCOSYLTRANSFERASE-RXN
GO:0008109  2.4.1.150-RXN
GO:0008114  1.1.1.43-RXN
GO:0008118  2.4.99.6-RXN
GO:0008119  THIOPURINE-S-METHYLTRANSFERASE-RXN
GO:0008131  RXN-9597
GO:0008184  GLYCOPHOSPHORYL-RXN
GO:0008239  3.4.14.11-RXN
GO:0008239  3.4.14.4-RXN
GO:0008240  3.4.14.10-RXN
GO:0008240  3.4.14.9-RXN
GO:0008242  PEPTIDYL-GLYCINAMIDASE-RXN
GO:0008310  3.1.11.1-RXN
GO:0008311  3.1.11.2-RXN
GO:0008422  3.2.1.21-RXN
GO:0008442  3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN
GO:0008449  3.1.6.14-RXN
GO:0008456  3.2.1.49-RXN
GO:0008459  CHONDROITIN-6-SULFOTRANSFERASE-RXN
GO:0008467  2.8.2.23-RXN
GO:0008480  SARCOSINE-DEHYDROGENASE-RXN
GO:0008482  PWY-5326
GO:0008486  3.6.1.52-RXN
GO:0008496  3.2.1.101-RXN
GO:0008534  3.2.2.23-RXN
GO:0008559  3.6.3.44-RXN
GO:0008564  3.6.3.50-RXN
GO:0008566  3.6.3.51-RXN
GO:0008568  3.6.4.3-RXN
GO:0008569  3.6.4.2-RXN
GO:0008569  3.6.4.5-RXN
GO:0008574  3.6.4.4-RXN
GO:0008670  DIENOYLCOAREDUCT-RXN
GO:0008672  KDGALDOL-RXN
GO:0008682  OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN
GO:0008692  OHBUTYRYL-COA-EPIM-RXN
GO:0008693  3-HYDROXYDECANOYL-ACP-DEHYDR-RXN
GO:0008700  4OH2OXOGLUTARALDOL-RXN
GO:0008725  3.2.2.21-RXN
GO:0008725  RXN0-5189
GO:0008734  RXN-9772
GO:0008741  RIBULOKIN-RXN
GO:0008745  3.4.24.32-RXN
GO:0008750  PYRNUTRANSHYDROGEN-RXN
GO:0008754  RXN0-5294
GO:0008768  UDPSUGARHYDRO-RXN
GO:0008769  3.4.13.3-RXN
GO:0008781  RXN-9990
GO:0008798  3.4.19.5-RXN
GO:0008805  RXN-21452
GO:0008809  CARNRACE-RXN
GO:0008810  RXN-2043
GO:0008814  CITTRANS-RXN
GO:0008816  CITRYLY-RXN
GO:0008817  R343-RXN
GO:0008821  3.1.22.4-RXN
GO:0008823  R170-RXN
GO:0008824  R524-RXN
GO:0008833  RXN-20410
GO:0008835  RXN-10058
GO:0008839  RXN-14014
GO:0008842  2.7.1.143-RXN
GO:0008847  3.1.27.6-RXN
GO:0008852  3.1.11.1-RXN
GO:0008853  3.1.11.2-RXN
GO:0008854  RXN0-2605
GO:0008855  3.1.11.6-RXN
GO:0008856  3.1.22.5-RXN
GO:0008859  3.1.13.1-RXN
GO:0008860  FERREDOXIN--NAD+-REDUCTASE-RXN
GO:0008863  FORMATEDEHYDROG-RXN
GO:0008871  2.7.7.46-RXN
GO:0008874  GLUCONATE-5-DEHYDROGENASE-RXN
GO:0008917  RXN-22502
GO:0008918  RXN-22172
GO:0008919  RXN0-5126
GO:0008940  NITRATREDUCT-RXN
GO:0008942  RXN0-6377
GO:0008946  3.1.13.3-RXN
GO:0008955  RXN-14712
GO:0008956  3.4.15.5-RXN
GO:0008960  PGLYCEROLTRANSI-RXN
GO:0008962  PGPPHOSPHA-RXN
GO:0008995  3.1.26.12-RXN
GO:0009002  3.4.16.4-RXN
GO:0009011  GLYCOGENSYN-RXN
GO:0009034  TRYPDEG-PWY
GO:0009035  3.1.21.3-RXN
GO:0009036  3.1.21.4-RXN
GO:0009040  R165-RXN
GO:0009044  3.2.1.37-RXN
GO:0009046  3.4.17.14-RXN
GO:0009392  RXN0-5225
GO:0010177  RXN-2202
GO:0010179  RXN-2981
GO:0010211  RXN-2982
GO:0010242  RXN0-5265
GO:0010280  RXN-5482
GO:0010283  RXN-8678
GO:0010283  RXN-8683
GO:0010284  RXN-8679
GO:0010284  RXN-8684
GO:0010303  3.2.1.10-RXN
GO:0010303  3.2.1.142-RXN
GO:0010303  RXN-1824
GO:0010326  R15-RXN
GO:0010420  RXN-9281
GO:0010435  RXN-10695
GO:0015016  HEPARITIN-SULFOTRANSFERASE-RXN
GO:0015021  4.2.2.8-RXN
GO:0015024  3.1.6.18-RXN
GO:0015035  DISULFOXRED-RXN
GO:0015043  LEGHEMOGLOBIN-REDUCTASE-RXN
GO:0015044  RUBREDOXIN--NAD+-REDUCTASE-RXN
GO:0015045  RUBREDOXIN--NADP+-REDUCTASE-RXN
GO:0015049  METHANE-MONOOXYGENASE-RXN
GO:0015407  3.6.3.17-RXN
GO:0015417  3.6.3.31-RXN
GO:0015422  3.6.3.18-RXN
GO:0015425  3.6.3.22-RXN
GO:0015434  RXN-21035
GO:0015436  3.6.3.38-RXN
GO:0015438  3.6.3.40-RXN
GO:0015599  ABC-12-RXN
GO:0015625  3.6.3.34-RXN
GO:0015625  ABC-11-RXN
GO:0015625  ABC-9-RXN
GO:0015668  3.1.21.5-RXN
GO:0015927  TREHALA-RXN
GO:0015929  3.2.1.52-RXN
GO:0016041  PWY-4341
GO:0016157  SUCROSE-SYNTHASE-RXN
GO:0016161  RXN-12279
GO:0016161  RXN-1827
GO:0016162  3.2.1.91-RXN
GO:0016217  R465-RXN
GO:0016263  2.4.1.122-RXN
GO:0016275  2.1.1.124-RXN
GO:0016285  3.4.11.14-RXN
GO:0016295  RXN-10727
GO:0016296  RXN-9549
GO:0016297  RXN-7902
GO:0016464  3.6.3.52-RXN
GO:0016508  LONG-CHAIN-ENOYL-COA-HYDRATASE-RXN
GO:0016603  RXN-19145
GO:0016618  HYDROXYPYRUVATE-REDUCTASE-RXN
GO:0016631  RXN1G-2527
GO:0016631  RXN1G-2544
GO:0016631  RXN1G-3232
GO:0016631  RXN1G-3256
GO:0016631  RXN1G-3613
GO:0016631  RXN1G-3641
GO:0016631  RXN1G-3667
GO:0016631  RXN1G-3993
GO:0016631  RXN1G-4140
GO:0016631  RXN1G-45
GO:0016633  GALACTONOLACTONE-DEHYDROGENASE-RXN
GO:0016691  CHLORIDE-PEROXIDASE-RXN
GO:0016720  1.14.99.33-RXN
GO:0016762  2.4.1.207-RXN
GO:0016805  3.4.13.18-RXN
GO:0016805  3.4.13.21-RXN
GO:0016807  3.4.18.1-RXN
GO:0016921  3.4.19.6-RXN
GO:0016977  3.2.1.132-RXN
GO:0016979  RXN-13039
GO:0016979  RXN-8654
GO:0016979  RXN-8655
GO:0016979  RXN0-1141
GO:0016985  3.2.1.78-RXN
GO:0016995  CHOLESTEROL-OXIDASE-RXN
GO:0016996  3.2.1.129-RXN
GO:0017042  GALACTOSYLCERAMIDASE-RXN
GO:0017042  GLYCOSYLCERAMIDASE-RXN
GO:0017042  RXN-22900
GO:0017105  1.14.99.32-RXN
GO:0018010  GLYCOPROTEIN-N-PALMITOYLTRANSFERASE-RXN
GO:0018271  BIOTINLIG-RXN
GO:0018455  ALCOHOL-DEHYDROGENASE-NADP+-RXN
GO:0018461  9-FLUORENOL-DEHYDROGENASE-RXN
GO:0018477  BENZALDEHYDE-DEHYDROGENASE-NADP+-RXN
GO:0018479  BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN
GO:0018489  RXN-2
GO:0018494  RXN-9403
GO:0018494  RXN-9419
GO:0018506  MALEYLACETATE-REDUCTASE-RXN
GO:0018520  1.3.1.67-RXN
GO:0018546  RXN-8833
GO:0018551  RXN-17803
GO:0018616  R305-RXN
GO:0018618  1.14.12.1-RXN
GO:0018620  PHTHALATE-45-DIOXYGENASE-RXN
GO:0018630  3-5-XYLENOL-METHYLHYDROXYLASE-RXN
GO:0018635  RXN-9407
GO:0018645  1.14.13.69-RXN
GO:0018659  4-HYDROXYBENZOATE-3-MONOOXYGENASE-RXN
GO:0018664  BENZOATE-4-MONOOXYGENASE-RXN
GO:0018665  1.14.13.18-RXN
GO:0018670  4-AMINOBENZOATE-1-MONOOXYGENASE-RXN
GO:0018671  1.14.13.33-RXN
GO:0018673  ANTHRANILOYL-COA-MONOOXYGENASE-RXN
GO:0018678  1.14.13.64-RXN
GO:0018679  RXN-623
GO:0018682  R461-RXN
GO:0018698  VCREDCHLOR-RXN
GO:0018711  RXN-2006
GO:0018712  R7-RXN
GO:0018713  RXN-8032
GO:0018719  R562-RXN
GO:0018720  PHENOLPHOS-RXN
GO:0018744  3.3.2.8-RXN
GO:0018752  R561-RXN
GO:0018754  RXN-8017
GO:0018766  R6-RXN
GO:0018772  R306-RXN
GO:0018778  RXN-9150
GO:0018811  R266-RXN
GO:0018815  RXN-645
GO:0018819  RXN-781
GO:0018862  PHENYLPCARB-RXN
GO:0019131  3.4.14.9-RXN
GO:0019137  RXN-9946
GO:0019139  PWY-2841
GO:0019141  1.1.1.209-RXN
GO:0019144  ADPSUGPPHOSPHAT-RXN
GO:0019152  ACETOINDEHYDROG-RXN
GO:0019155  IMILACTDEHYDROG-RXN
GO:0019156  3.2.1.68-RXN
GO:0019156  RXN-12280
GO:0019156  RXN-14380
GO:0019171  4.2.1.59-RXN
GO:0019174  THTOREDUCT-RXN
GO:0022871  RXN-15094
GO:0030267  GLYOXYLATE-REDUCTASE-NADP+-RXN
GO:0030270  2.3.1.101-RXN
GO:0030283  1.1.1.51-RXN
GO:0030341  4.2.2.5-RXN
GO:0030412  4.3.1.4-RXN
GO:0030570  4.2.2.2-RXN
GO:0030596  3.2.1.40-RXN
GO:0030598  3.2.2.22-RXN
GO:0030599  RXN-19782
GO:0030600  3.1.1.73-RXN
GO:0030612  RXN-10737
GO:0030734  POLYSACCHARIDE-O-METHYLTRANSFERASE-RXN
GO:0030748  AMINE-N-METHYLTRANSFERASE-RXN
GO:0030782  2.1.1.122-RXN
GO:0030783  2.1.1.123-RXN
GO:0030786  2.1.1.128-RXN
GO:0030792  2.1.1.138-RXN
GO:0031176  3.2.1.8-RXN
GO:0031216  3.2.1.135-RXN
GO:0031217  3.2.1.74-RXN
GO:0031218  3.2.1.89-RXN
GO:0031219  3.2.1.65-RXN
GO:0031220  RXN-9025
GO:0032001  2.4.1.24-RXN
GO:0032428  3.2.1.53-RXN
GO:0032450  RXN-15910
GO:0032778  TRANS-RXN-459
GO:0033164  2.4.1.232-RXN
GO:0033196  1.11.1.15-RXN
GO:0033237  11-BETA-HYDROXYSTEROID-DEHYDROGENASE-RXN
GO:0033250  BETA-LACTAMASE-RXN
GO:0033251  BETA-LACTAMASE-RXN
GO:0033705  GDP-4-DEHYDRO-D-RHAMNOSE-REDUCTASE-RXN
GO:0033707  1.1.1.285-RXN
GO:0033708  ISOCITRATE-DEHYDROGENASE-NAD+-RXN
GO:0033708  RXN-7970
GO:0033718  RXN-7961
GO:0033718  RXN-7962
GO:0033718  RXN-7963
GO:0033718  RXN-7965
GO:0033718  RXN-7966
GO:0033721  ALDEHYDE-DEHYDROGENASE-NADP+-RXN
GO:0033722  MALONATE-SEMIALDEHYDE-DEHYDROGENASE-RXN
GO:0033727  1.2.99.3-RXN
GO:0033727  1.2.99.7-RXN
GO:0033727  CARBOXYLATE-REDUCTASE-RXN
GO:0033729  RXN-10693
GO:0033731  RXN-14476
GO:0033737  1.5.1.35-RXN
GO:0033748  RXN0-5256
GO:0033754  RXN-8665
GO:0033770  RXN-7750
GO:0033771  RXN-19645
GO:0033772  RXN-7783
GO:0033772  RXN-8671
GO:0033773  ISOFLAVONE-2-HYDROXYLASE-RXN
GO:0033783  RXN-7980
GO:0033799  RXN-13912
GO:0033820  2.4.1.26-RXN
GO:0033821  2.4.1.27-RXN
GO:0033822  2.4.1.28-RXN
GO:0033824  2.4.1.140-RXN
GO:0033825  2.4.1.161-RXN
GO:0033826  RXN-12419
GO:0033827  2.4.1.197-RXN
GO:0033833  RXN-10738
GO:0033835  RXN-5002
GO:0033835  RXN-5004
GO:0033835  RXN-7759
GO:0033835  RXN-9699
GO:0033841  2.4.1.243-RXN
GO:0033843  RXN-12415
GO:0033843  RXN-9461
GO:0033844  2.5.1.5-RXN
GO:0033854  PREPHENATE-TRANSAMINE-RXN
GO:0033857  2.7.4.24-RXN
GO:0033862  2.7.4.22-RXN
GO:0033867  2.7.11.8-RXN
GO:0033868  2.7.11.9-RXN
GO:0033871  2.8.2.29-RXN
GO:0033872  2.8.2.30-RXN
GO:0033878  STEROL-ESTERASE-RXN
GO:0033878  TRIACYLGLYCEROL-LIPASE-RXN
GO:0033886  3.1.6.7-RXN
GO:0033889  3.1.6.15-RXN
GO:0033890  3.1.13.5-RXN
GO:0033891  3.1.21.6-RXN
GO:0033892  3.1.25.1-RXN
GO:0033893  3.1.26.6-RXN
GO:0033894  3.1.26.7-RXN
GO:0033896  3.1.26.10-RXN
GO:0033897  3.1.27.5-RXN
GO:0033898  RXN-19924
GO:0033899  3.1.27.3-RXN
GO:0033899  RXN-19928
GO:0033900  3.1.27.7-RXN
GO:0033901  3.1.27.8-RXN
GO:0033902  3.1.27.10-RXN
GO:0033903  3.2.1.6-RXN
GO:0033904  3.2.1.11-RXN
GO:0033905  3.2.1.32-RXN
GO:0033906  3.2.1.36-RXN
GO:0033907  3.2.1.38-RXN
GO:0033908  3.2.1.43-RXN
GO:0033909  RXN-20949
GO:0033910  3.2.1.60-RXN
GO:0033911  3.2.1.61-RXN
GO:0033912  3.2.1.64-RXN
GO:0033913  3.2.1.71-RXN
GO:0033914  3.2.1.72-RXN
GO:0033915  3.2.1.77-RXN
GO:0033918  3.2.1.83-RXN
GO:0033919  3.2.1.84-RXN
GO:0033921  3.2.1.87-RXN
GO:0033922  3.2.1.92-RXN
GO:0033923  3.2.1.94-RXN
GO:0033924  3.2.1.95-RXN
GO:0033925  3.2.1.96-RXN
GO:0033926  3.2.1.97-RXN
GO:0033927  3.2.1.98-RXN
GO:0033928  3.2.1.100-RXN
GO:0033929  3.2.1.102-RXN
GO:0033930  3.2.1.103-RXN
GO:0033931  3.2.1.109-RXN
GO:0033932  3.2.1.111-RXN
GO:0033933  3.2.1.115-RXN
GO:0033934  3.2.1.116-RXN
GO:0033935  3.2.1.120-RXN
GO:0033936  3.2.1.121-RXN
GO:0033937  3.2.1.124-RXN
GO:0033938  3.2.1.127-RXN
GO:0033939  3.2.1.131-RXN
GO:0033940  3.2.1.136-RXN
GO:0033941  3.2.1.137-RXN
GO:0033942  3.2.1.141-RXN
GO:0033943  3.2.1.145-RXN
GO:0033944  3.2.1.146-RXN
GO:0033945  3.2.1.150-RXN
GO:0033946  3.2.1.151-RXN
GO:0033947  3.2.1.152-RXN
GO:0033948  3.2.1.153-RXN
GO:0033949  3.2.1.154-RXN
GO:0033950  3.2.1.155-RXN
GO:0033951  3.2.1.156-RXN
GO:0033952  3.2.1.157-RXN
GO:0033953  3.2.1.158-RXN
GO:0033954  3.2.1.159-RXN
GO:0033956  3.2.1.161-RXN
GO:0033957  3.2.1.162-RXN
GO:0033958  3.2.2.15-RXN
GO:0033959  3.2.2.17-RXN
GO:0033963  RXN-8650
GO:0033963  RXN-8651
GO:0033964  3.5.1.69-RXN
GO:0033965  3.5.1.70-RXN
GO:0033974  3.6.1.24-RXN
GO:0033976  2-HALOACID-DEHALOGENASE-RXN
GO:0033976  RXN-6264
GO:0033989  4.2.1.107-RXN
GO:0033994  4.2.2.14-RXN
GO:0033995  4.2.2.15-RXN
GO:0033996  4.2.2.16-RXN
GO:0033997  4.2.2.17-RXN
GO:0033998  4.2.2.18-RXN
GO:0033999  4.2.2.19-RXN
GO:0034000  4.2.2.19-RXN
GO:0034000  4.2.2.5-RXN
GO:0034000  RXN-11572
GO:0034001  4.2.2.21-RXN
GO:0034025  6.3.1.12-RXN
GO:0034256  RXN-7678
GO:0034317  RXN-8443
GO:0034386  GABATRANSAM-RXN
GO:0034547  RXN-8018
GO:0034548  RXN-8019
GO:0034549  RXN-8020
GO:0034557  RXN-8848
GO:0034701  3.4.11.4-RXN
GO:0034795  RXN-8697
GO:0034912  RXN5F9-56
GO:0034951  RXN-8846
GO:0035446  RXN1G-4
GO:0035671  RXN-12267
GO:0036140  RXN-11321
GO:0036209  RXN-15437
GO:0036222  RXN0-5074
GO:0036397  FORMATEDEHYDROG-RXN
GO:0036426  2.4.1.54-RXN
GO:0036524  RXN-17630
GO:0036524  RXN-17632
GO:0036524  RXN-17634
GO:0042300  RXN-7570
GO:0042356  GDP-4-DEHYDRO-D-RHAMNOSE-REDUCTASE-RXN
GO:0042561  RXN-8434
GO:0042781  3.1.26.11-RXN
GO:0042972  3.2.1.73-RXN
GO:0042973  3.2.1.39-RXN
GO:0043135  RXN-10969
GO:0043136  GLYCEROL-1-PHOSPHATASE-RXN
GO:0043431  2.1.1.64-RXN
GO:0043719  OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN
GO:0043723  RXN-10058
GO:0043737  3.1.21.7-RXN
GO:0043741  RXN-5181
GO:0043752  2.7.1.156-RXN
GO:0043793  RXN-8124
GO:0043799  1.4.3.19-RXN
GO:0043799  RXN-8672
GO:0043799  RXN-8673
GO:0043799  RXN-8674
GO:0043806  KETOBUTFORMLY-RXN
GO:0043817  ABC-16-RXN
GO:0043822  3.1.26.8-RXN
GO:0043833  RXN-8101
GO:0043833  RXN-8103
GO:0043836  R127-RXN
GO:0043840  RXN-7708
GO:0043842  KDOTRANS-RXN
GO:0043842  KDOTRANS2-RXN
GO:0043864  G-5841
GO:0043878  RXN-3443
GO:0043885  1.2.7.4-RXN
GO:0043890  3.1.6.4-RXN
GO:0043891  GAPDHSYNEC-RXN
GO:0043895  2.4.1.19-RXN
GO:0043896  3.2.1.70-RXN
GO:0043897  3.2.1.133-RXN
GO:0043910  RXN-9385
GO:0043916  3.2.2.21-RXN
GO:0044683  RXN-8125
GO:0044686  RXN-11108
GO:0044876  RXN-15803
GO:0045130  KERATAN-SULFOTRANSFERASE-RXN
GO:0045135  4.2.2.3-RXN
GO:0045140  RXN3O-581
GO:0045148  3.4.11.4-RXN
GO:0045290  1.1.1.117-RXN
GO:0045300  RXN-7903
GO:0045430  CHALCONE-ISOMERASE-RXN
GO:0045486  NARINGENIN-3-DIOXYGENASE-RXN
GO:0046353  AMINOGLYCOSIDE-N3-ACETYLTRANSFERASE-RXN
GO:0046353  GENTAMICIN-3-N-ACETYLTRANSFERASE-RXN
GO:0046424  RXN-1121
GO:0046537  3PGAREARR-RXN
GO:0046538  RXN-15513
GO:0046554  MALATE-DEHYDROGENASE-NADP+-RXN
GO:0046555  3.1.1.72-RXN
GO:0046556  3.2.1.55-RXN
GO:0046557  3.2.1.75-RXN
GO:0046558  3.2.1.99-RXN
GO:0046563  METHANOL-OXIDASE-RXN
GO:0046566  RXN-8460
GO:0046568  1.1.1.265-RXN
GO:0046589  3.1.27.3-RXN
GO:0046922  2.4.1.221-RXN
GO:0046961  ATPSYN-RXN
GO:0047005  1.1.1.147-RXN
GO:0047006  1.1.1.149-RXN
GO:0047011  1.1.1.168-RXN
GO:0047012  1.1.1.170-RXN
GO:0047023  1.1.1.209-RXN
GO:0047026  1.1.1.213-RXN
GO:0047029  RXN-7632
GO:0047034  1.1.1.232-RXN
GO:0047042  1.1.1.209-RXN
GO:0047047  1.1.1.92-RXN
GO:0047057  1.1.4.1-RXN
GO:0047063  1.10.2.1-RXN
GO:0047086  1.14.13.54-RXN
GO:0047094  1.14.13.63-RXN
GO:0047095  1.14.13.66-RXN
GO:0047099  1.17.1.1-RXN
GO:0047117  ENOYL-ACP-REDUCT-NADPH-RXN
GO:0047127  1.5.1.25-RXN
GO:0047134  1.6.4.4-RXN
GO:0047137  1.7.1.12-RXN
GO:0047138  AQUACOBALAMIN-REDUCTASE-RXN
GO:0047142  1.8.4.7-RXN
GO:0047152  2.1.1.90-RXN
GO:0047155  2.1.3.7-RXN
GO:0047157  2.3.1.100-RXN
GO:0047193  2.3.1.70-RXN
GO:0047196  2.3.1.75-RXN
GO:0047197  2.3.1.77-RXN
GO:0047207  2.4.1.100-RXN
GO:0047211  2.4.1.113-RXN
GO:0047217  2.4.1.125-RXN
GO:0047223  2.4.1.146-RXN
GO:0047224  2.4.1.147-RXN
GO:0047225  2.4.1.148-RXN
GO:0047228  2.4.1.157-RXN
GO:0047232  2.4.1.150-RXN
GO:0047238  RXN-16325
GO:0047242  2.4.1.181-RXN
GO:0047243  2.4.1.185-RXN
GO:0047252  2.4.1.199-RXN
GO:0047255  2.4.1.205-RXN
GO:0047259  2.4.1.32-RXN
GO:0047270  RXN0-5125
GO:0047271  2.4.1.74-RXN
GO:0047272  2.4.1.78-RXN
GO:0047321  2.7.99.1-RXN
GO:0047339  2.7.7.28-RXN
GO:0047346  2.7.7.36-RXN
GO:0047347  2.7.7.37-RXN
GO:0047356  RXN-18380
GO:0047361  2.7.8.9-RXN
GO:0047375  3.1.1.58-RXN
GO:0047384  3.1.3.47-RXN
GO:0047420  3.5.1.81-RXN
GO:0047430  3.6.1.44-RXN
GO:0047444  RXN-9988
GO:0047457  4.2.2.13-RXN
GO:0047468  RXN-16999
GO:0047481  6.3.2.16-RXN
GO:0047488  4.2.2.7-RXN
GO:0047490  RXN-19781
GO:0047491  4.2.2.11-RXN
GO:0047492  4.2.2.12-RXN
GO:0047495  PGLYCEROLTRANSII-RXN
GO:0047500  +-BORNEOL-DEHYDROGENASE-RXN
GO:0047501  +-NEOMENTHOL-DEHYDROGENASE-RXN
GO:0047502  +-SABINOL-DEHYDROGENASE-RXN
GO:0047514  13-BETA-GLUCAN-PHOSPHORYLASE-RXN
GO:0047522  15-OXOPROSTAGLANDIN-13-REDUCTASE-RXN
GO:0047530  24-DIAMINOPENTANOATE-DEHYDROGENASE-RXN
GO:0047551  2-OXOALDEHYDE-DEHYDROGENASE-NAD+-RXN
GO:0047552  2-OXOALDEHYDE-DEHYDROGENASE-NADP+-RXN
GO:0047559  3-DEHYDRO-L-GULONATE-2-DEHYDROGENASE-RXN
GO:0047606  ACETONE-CYANHYDRIN-LYASE-RXN
GO:0047615  ACTINOMYCIN-LACTONASE-RXN
GO:0047616  ACYL-COA-DEHYDROGENASE-NADP+-RXN
GO:0047642  ALDOSE-BETA-FRUCTOSYLTRANSFERASE-RXN
GO:0047643  ALGINATE-SYNTHASE-RXN
GO:0047659  ALPHA-SANTONIN-12-REDUCTASE-RXN
GO:0047663  AMINOGLYCOSIDE-N6-ACETYLTRANSFERASE-RXN
GO:0047681  ARYL-ALCOHOL-DEHYDROGENASE-NADP+-RXN
GO:0047684  ARYLAMINE-GLUCOSYLTRANSFERASE-RXN
GO:0047687  ASCORBATE-23-DIOXYGENASE-RXN
GO:0047701  BETA-L-ARABINOSIDASE-RXN
GO:0047718  INDANOL-DEHYDROGENASE-RXN
GO:0047720  RXN-19838
GO:0047729  CARNITINE-DECARBOXYLASE-RXN
GO:0047739  CEPHALOSPORIN-C-DEACETYLASE-RXN
GO:0047746  CHLOROPHYLLASE-RXN
GO:0047747  CHOLATE--COA-LIGASE-RXN
GO:0047748  CHOLESTANETETRAOL-26-DEHYDROGENASE-RXN
GO:0047751  CHOLESTENONE-5-ALPHA-REDUCTASE-RXN
GO:0047753  CHOLINE-SULFATASE-RXN
GO:0047759  BUTANAL-DEHYDROGENASE-RXN
GO:0047760  BUTYRATE--COA-LIGASE-RXN
GO:0047764  2.7.11.17-RXN
GO:0047765  CALDESMON-PHOSPHATASE-RXN
GO:0047770  CARBOXYLATE-REDUCTASE-RXN
GO:0047774  CIS-2-ENOYL-COA-REDUCTASE-NADPH-RXN
GO:0047786  CORTISONE-ALPHA-REDUCTASE-RXN
GO:0047787  CHOLESTENONE-5-BETA-REDUCTASE-RXN
GO:0047787  CORTISONE-BETA-REDUCTASE-RXN
GO:0047791  CUCURBITACIN-DELTA-23-REDUCTASE-RXN
GO:0047819  D-ASPARTATE-OXIDASE-RXN
GO:0047819  D-GLUTAMATE-OXIDASE-RXN
GO:0047829  D-NOPALINE-DEHYDROGENASE-RXN
GO:0047830  D-OCTOPINE-DEHYDROGENASE-RXN
GO:0047837  D-XYLOSE-1-DEHYDROGENASE-NADP+-RXN
GO:0047839  DATPDGTP--DNA-PURINE-TRANSFERASE-RXN
GO:0047847  DEOXYURIDINE-PHOSPHORYLASE-RXN
GO:0047848  DEPHOSPHO-REDUCTASE-KINASE-KINASE-RXN
GO:0047849  2.4.1.125-RXN
GO:0047880  ERYTHRULOSE-REDUCTASE-RXN
GO:0047881  ESTRADIOL-17-ALPHA-DEHYDROGENASE-RXN
GO:0047903  FRUCTOSE-5-DEHYDROGENASE-NADP+-RXN
GO:0047909  GALACTOLIPID-O-ACYLTRANSFERASE-RXN
GO:0047910  GALACTOSE-1-DEHYDROGENASE-NADP+-RXN
GO:0047916  GDP-6-DEOXY-D-TALOSE-4-DEHYDROGENASE-RXN
GO:0047934  GLUCOSE-1-DEHYDROGENASE-NAD+-RXN
GO:0047935  GLUCOSE-1-DEHYDROGENASE-NADP+-RXN
GO:0047936  GLUCOSE-1-DEHYDROGENASE-RXN
GO:0047952  GLYC3PDEHYDROGBIOSYN-RXN
GO:0047953  GLYCEROL-2-DEHYDROGENASE-NADP+-RXN
GO:0047956  GLYCEROL-DEHYDROGENASE-NADP+-RXN
GO:0047965  GLYCOPROTEIN-O-FATTY-ACYLTRANSFERASE-RXN
GO:0047988  HYDROXYACID-OXOACID-TRANSHYDROGENASE-RXN
GO:0047991  HAONITRO-RXN
GO:0047995  HYDROXYPHENYLPYRUVATE-REDUCTASE-RXN
GO:0048258  KETOGLUCOSE-REDUCTASE-RXN
GO:0050009  ISOPROPANOL-DEHYDROGENASE-NADP+-RXN
GO:0050026  L-GLYCOL-DEHYDROGENASE-RXN
GO:0050029  PWY-5311
GO:0050039  RXN-15744
GO:0050056  LINALOOL-8-MONOOXYGENASE-RXN
GO:0050063  2.7.11.29-RXN
GO:0050065  PWY-5324
GO:0050085  MANNITOL-2-DEHYDROGENASE-NADP+-RXN
GO:0050090  MANNURONATE-REDUCTASE-RXN
GO:0050105  L-GULONOLACTONE-OXIDASE-RXN
GO:0050107  MONOTERPENOL-O-ACETYLTRANSFERASE-RXN
GO:0050108  MONOTERPENYL-PYROPHOSPHATASE-RXN
GO:0050109  MORPHINE-6-DEHYDROGENASE-RXN
GO:0050110  3.2.1.110-RXN
GO:0050115  MYOSIN-LIGHT-CHAIN-PHOSPHATASE-RXN
GO:0050138  NICOTINATE-DEHYDROGENASE-RXN
GO:0050140  NITRATE-REDUCTASE-CYTOCHROME-RXN
GO:0050141  NITROETHANE-OXIDASE-RXN
GO:0050144  NUCLEOSIDE-DEOXYRIBOSYLTRANSFERASE-RXN
GO:0050147  NUCLEOSIDE-RIBOSYLTRANSFERASE-RXN
GO:0050155  ORNITHINELYSINE-AMINOTRANSFERASE-RXN
GO:0050164  OXOGLUTARATE-DEHYDROGENASE-NADP+-RXN
GO:0050169  PEPTIDE-TRYPTOPHAN-23-DIOXYGENASE-RXN
GO:0050171  PHENOL-BETA-GLUCOSYLTRANSFERASE-RXN
GO:0050173  PHENYLALANINE-ADENYLYLTRANSFERASE-RXN
GO:0050184  PHOSPHATIDYLCHOLINE-DESATURASE-RXN
GO:0050184  RXN-8322
GO:0050184  RXN-8324
GO:0050184  RXN-8327
GO:0050184  RXN-8328
GO:0050184  RXN-8360
GO:0050196  PHOSPHORYLASE-PHOSPHATASE-RXN
GO:0050200  PLASMALOGEN-SYNTHASE-RXN
GO:0050213  PROGESTERONE-5-ALPHA-REDUCTASE-RXN
GO:0050228  PTERIN-DEAMINASE-RXN
GO:0050229  PTEROCARPIN-SYNTHASE-RXN
GO:0050230  PURINE-IMIDAZOLE-RING-CYCLASE-RXN
GO:0050241  PYRROLINE-2-CARBOXYLATE-REDUCTASE-RXN
GO:0050243  PYRUVATE-DEHYDROGENASE-NADP+-RXN
GO:0050256  RIBITOL-5-PHOSPHATE-2-DEHYDROGENASE-RXN
GO:0050259  RIBOSE-1-DEHYDROGENASE-NADP+-RXN
GO:0050269  RXN-1241
GO:0050287  SORBOSE-5-DEHYDROGENASE-NADP+-RXN
GO:0050303  PWY-5314
GO:0050308  SUGAR-PHOSPHATASE-RXN
GO:0050321  TAU-PROTEIN-KINASE-RXN
GO:0050326  TAXIFOLIN-8-MONOOXYGENASE-RXN
GO:0050343  TRANS-2-ENOYL-COA-REDUCTASE-NAD+-RXN
GO:0050359  TROPOMYOSIN-KINASE-RXN
GO:0050363  TRYPTOPHAN-DEHYDROGENASE-RXN
GO:0050372  UBIQUITIN--CALMODULIN-LIGASE-RXN
GO:0050378  PWY-4861
GO:0050391  VALINE-DEHYDROGENASE-NADP+-RXN
GO:0050407  GLYCOGEN-SYNTHASE-D-PHOSPHATASE-RXN
GO:0050408  PYRUVATE-KINASE-PHOSPHATASE-RXN
GO:0050417  ASPARAGHYD-RXN
GO:0050417  GLUTAMIN-RXN
GO:0050444  AQUACOBALAMIN-REDUCTASE-NADPH-RXN
GO:0050450  CITSYN-RXN
GO:0050453  COBIIALAMIN-REDUCTASE-RXN
GO:0050465  1.7.1.9-RXN
GO:0050492  1.1.1.261-RXN
GO:0050510  RXN-16324
GO:0050516  2.7.1.151-RXN
GO:0050525  3.1.1.74-RXN
GO:0050527  3.1.1.76-RXN
GO:0050534  RXN-12002
GO:0050553  4.2.3.17-RXN
GO:0050563  6.2.1.34-RXN
GO:0050572  1.1.1.264-RXN
GO:0050582  1.1.3.41-RXN
GO:0050589  RXN-602
GO:0050598  1.14.13.77-RXN
GO:0050600  1.14.99.31-RXN
GO:0050602  1.14.99.34-RXN
GO:0050627  1.8.1.15-RXN
GO:0050659  RXN-7953
GO:0050659  RXN-7954
GO:0050697  TCEREDCHLOR-RXN
GO:0051060  RXN-1824
GO:0051063  CDPREDUCT-RXN
GO:0051118  3.2.1.59-RXN
GO:0051669  3.2.1.80-RXN
GO:0051670  3.2.1.7-RXN
GO:0051675  3.2.1.57-RXN
GO:0051717  3.1.3.62-RXN
GO:0051745  ISPH2-RXN
GO:0051752  2.7.9.5-RXN
GO:0051903  RXN-2962
GO:0051996  RXN66-281
GO:0052579  RXN-5164
GO:0052580  RXN-5164
GO:0052589  RXNI-3
GO:0052593  RXN-1401
GO:0052594  AMACETOXID-RXN
GO:0052596  RXN-10817
GO:0052597  RXN-9599
GO:0052599  RXN-8244
GO:0052601  RXN-9409
GO:0052602  RXN-8833
GO:0052603  RXN-8834
GO:0052608  RXN-8214
GO:0052609  RXN-8218
GO:0052612  RXN-8187
GO:0052613  RXN-8186
GO:0052615  1.14.13.78-RXN
GO:0052618  RXN-8080
GO:0052619  RXN-8081
GO:0052621  RXN0-5359
GO:0052622  RXN-4303
GO:0052623  RXN-4305
GO:0052624  RXN-6723
GO:0052624  RXN-7569
GO:0052641  RXN-11660
GO:0052642  RXNQT-4375
GO:0052654  BRANCHED-CHAINAMINOTRANSFERLEU-RXN
GO:0052662  RXN-7978
GO:0052662  RXN-7979
GO:0052664  RXN-11045
GO:0052665  RXN0-5143
GO:0052672  RXN-11629
GO:0052724  RXN-10971
GO:0052741  1.14.13.84-RXN
GO:0052750  RXN-8666
GO:0052761  3.2.1.165-RXN
GO:0052762  RXN-12269
GO:0052773  RXN-12543
GO:0052818  RXN-7992
GO:0052819  2.4.1.48-RXN
GO:0052821  3.2.2.21-RXN
GO:0052822  3.2.2.21-RXN
GO:0052840  RXN-10963
GO:0052843  RXN-10977
GO:0052844  RXN-10978
GO:0052846  RXN-10965
GO:0052847  RXN-10975
GO:0052849  RXN0-6676
GO:0052850  RXN0-6677
GO:0052861  3.2.1.6-RXN
GO:0052862  3.2.1.6-RXN
GO:0052871  RXN-11003
GO:0052887  RXN-11357
GO:0052888  RXN-9929
GO:0052894  RXN-10464
GO:0052903  RXN-9940
GO:0052933  RXN-2861
GO:0061690  RXN-13031
GO:0061712  RXN-14531
GO:0070040  RXN0-7007
GO:0070226  SULFFEOXIDO-RXN
GO:0070635  RXN-8441
GO:0070774  CERAMIDASE-YEAST-RXN
GO:0070780  RXN3DJ-25
GO:0071972  RXN-11349
GO:0072547  RXN-11260
GO:0072550  RXN-11262
GO:0080002  RXN-6142
GO:0080004  RXN-9637
GO:0080012  RXN-11263
GO:0080014  RXN-9631
GO:0080015  RXN-5103
GO:0080030  RXN-10711
GO:0080031  RXNQT-4366
GO:0080032  RXN-10767
GO:0080046  RXN-10788
GO:0080049  RXN-1439
GO:0080066  RXN-2209
GO:0080067  RXNQT-4329
GO:0080068  RXNQT-4330
GO:0080069  RXNQT-4332
GO:0080070  RXNQT-4333
GO:0080071  RXN-1443
GO:0080079  RXN-10773
GO:0080098  RXN3O-4157
GO:0080102  RXN-2221
GO:0080109  RXN-7567
GO:0080123  RXN-10435
GO:0080123  RXN-10457
GO:0080123  RXN-10459
GO:0097008  RXN-8619
GO:0101014  ICITDEHASE-KIN-PHOSPHA
GO:0102003  1.14.19.4-RXN
GO:0102006  2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN
GO:0102009  3.4.13.9-RXN
GO:0102013  ABC-13-RXN
GO:0102028  CYSPH-RXN
GO:0102029  DLACTDEHYDROGFAD-RXN
GO:0102037  R361-RXN
GO:0102038  R362-RXN
GO:0102042  RXN-10032
GO:0102044  RXN-10421
GO:0102045  RXN-10422
GO:0102046  RXN-10427
GO:0102047  RXN-10429
GO:0102048  RXN-10430
GO:0102049  RXN-10431
GO:0102050  RXN-10432
GO:0102051  RXN-10433
GO:0102052  RXN-10434
GO:0102059  RXN-11973
GO:0102063  RXN-10598
GO:0102065  RXN-10602
GO:0102066  RXN-10603
GO:0102070  RXN-1064
GO:0102071  RXN-1065
GO:0102081  RXN-10822
GO:0102083  RXN-10857
GO:0102084  RXN-10870
GO:0102085  RXN-10884
GO:0102086  RXN-10885
GO:0102087  RXN-10886
GO:0102088  RXN-10887
GO:0102089  RXN-10888
GO:0102090  RXN-10909
GO:0102091  RXN-10962
GO:0102093  RXN-10985
GO:0102094  RXN-11046
GO:0102104  RXN-11224
GO:0102109  RXN-11261
GO:0102111  RXN-113
GO:0102115  RXN-11338
GO:0102119  RXN-11360
GO:0102121  RXN-11375
GO:0102123  RXN-11385
GO:0102124  RXN-11387
GO:0102125  RXN-11388
GO:0102126  RXN-1142
GO:0102128  RXN-11468
GO:0102133  RXN-11493
GO:0102134  RXN-11529
GO:0102135  RXN-11530
GO:0102137  RXN-11537
GO:0102138  RXN-11538
GO:0102140  RXN-11557
GO:0102141  RXN-11560
GO:0102142  RXN-11561
GO:0102150  RXN-11668
GO:0102151  RXN-11669
GO:0102152  RXN-11671
GO:0102154  RXN-11685
GO:0102156  RXN-11705
GO:0102157  RXN-11729
GO:0102163  RXN-11785
GO:0102175  RXN-11928
GO:0102182  RXN-11938
GO:0102189  RXN-11957
GO:0102191  RXN-11959
GO:0102197  RXN-12087
GO:0102199  RXN-12112
GO:0102201  RXN-12117
GO:0102210  RXN-12173
GO:0102211  RXN-12174
GO:0102213  RXN-12184
GO:0102214  RXN-12185
GO:0102216  RXN-12201
GO:0102217  RXN-12202
GO:0102218  RXN-12203
GO:0102219  RXN-12204
GO:0102222  RXN-12218
GO:0102223  RXN-12258
GO:0102223  RXN-9304
GO:0102223  RXN-9305
GO:0102229  RXN-12278
GO:0102232  RXN-12281
GO:0102233  RXN-12292
GO:0102234  RXN-12293
GO:0102235  RXN-12295
GO:0102236  RXN-12296
GO:0102238  RXN-12307
GO:0102243  RXN-12325
GO:0102244  RXN-12332
GO:0102247  RXN-12361
GO:0102248  RXN-12383
GO:0102249  RXN-12386
GO:0102250  RXN-12392
GO:0102252  RXN-12420
GO:0102253  RXN-12426
GO:0102254  RXN-12427
GO:0102255  RXN-12428
GO:0102256  RXN-12429
GO:0102257  RXN-12430
GO:0102258  RXN-12433
GO:0102259  RXN-12434
GO:0102264  RXN-12456
GO:0102265  RXN-12457
GO:0102272  RXN-12528
GO:0102273  RXN-12529
GO:0102274  RXN-12532
GO:0102275  RXN-12534
GO:0102277  RXN-12544
GO:0102279  RXN-12563
GO:0102280  RXN-12582
GO:0102281  RXN-12612
GO:0102286  RXN-12667
GO:0102287  RXN-12668
GO:0102292  RXN-12683
GO:0102293  RXN-12686
GO:0102295  RXN-12699
GO:0102297  RXN-12720
GO:0102298  RXN-12728
GO:0102301  RXN-12777
GO:0102309  RXN-12930
GO:0102310  RXN-12940
GO:0102321  MONOMER-17239
GO:0102324  RXN-13157
GO:0102326  RXN-13171
GO:0102327  RXN-13247
GO:0102328  RXN-13248
GO:0102329  RXN-13251
GO:0102330  RXN-13258
GO:0102331  RXN-13259
GO:0102332  RXN-13260
GO:0102333  RXN-13261
GO:0102352  RXN-13336
GO:0102356  RXN-13373
GO:0102357  RXN-13385
GO:0102358  RXN-13448
GO:0102359  RXN-13450
GO:0102360  RXN-13452
GO:0102361  RXN-13471
GO:0102362  RXN-13472
GO:0102363  RXN-13475
GO:0102365  RXN-13486
GO:0102366  RXN-13487
GO:0102367  RXN-13488
GO:0102368  RXN-13489
GO:0102369  RXN-13491
GO:0102370  RXN-13497
GO:0102371  RXN-13498
GO:0102372  RXN-13500
GO:0102373  RXN-13501
GO:0102374  RXN-13502
GO:0102376  RXN-13507
GO:0102377  RXN-13511
GO:0102378  RXN-13512
GO:0102379  RXN-13514
GO:0102380  RXN-13516
GO:0102381  RXN-13517
GO:0102382  RXN-13518
GO:0102383  RXN-13520
GO:0102384  RXN-13521
GO:0102385  RXN-13522
GO:0102386  RXN-13536
GO:0102387  RXN-13542
GO:0102391  RXN-13614
GO:0102392  RXN-13623
GO:0102393  RXN-13624
GO:0102394  RXN-13637
GO:0102398  RXN-13657
GO:0102399  RXN-13658
GO:0102400  RXN-13667
GO:0102402  RXN-13694
GO:0102404  RXN-13701
GO:0102406  RXN-13728
GO:0102410  RXN-13765
GO:0102411  RXN-13766
GO:0102413  RXN-13791
GO:0102414  RXN-13797
GO:0102415  RXN-13798
GO:0102416  RXN-13799
GO:0102417  RXN-13800
GO:0102418  RXN-13801
GO:0102420  RXN-13805
GO:0102421  RXN-13813
GO:0102422  RXN-13814
GO:0102423  RXN-13818
GO:0102424  RXN-13821
GO:0102425  RXN-13822
GO:0102426  RXN-13823
GO:0102427  RXN-13828
GO:0102428  RXN-13830
GO:0102429  RXN-13831
GO:0102432  RXN-13906
GO:0102433  RXN-13907
GO:0102434  RXN-13908
GO:0102435  RXN-13910
GO:0102436  RXN-13911
GO:0102438  RXN-13914
GO:0102439  RXN-13916
GO:0102440  RXN-13918
GO:0102441  RXN-13919
GO:0102442  RXN-13920
GO:0102444  RXN-13929
GO:0102445  RXN-13930
GO:0102446  RXN-13932
GO:0102447  RXN-13933
GO:0102448  RXN-13934
GO:0102449  RXN-13935
GO:0102450  RXN-13936
GO:0102451  RXN-13937
GO:0102455  RXN-13965
GO:0102456  RXN-13967
GO:0102458  RXN-13970
GO:0102459  RXN-14005
GO:0102460  RXN-14008
GO:0102461  RXN-14009
GO:0102462  RXN-14011
GO:0102463  RXN-14012
GO:0102464  RXN-14016
GO:0102465  RXN-14018
GO:0102466  RXN-14019
GO:0102470  RXN-11685
GO:0102471  RXN-14076
GO:0102473  RXN-14079
GO:0102474  RXN-14079
GO:0102475  RXN-14081
GO:0102477  RXN-14088
GO:0102479  RXN-14109
GO:0102480  RXN-14129
GO:0102483  RXN-14179
GO:0102484  RXN-14182
GO:0102485  RXN-14195
GO:0102486  RXN-14198
GO:0102487  RXN-14199
GO:0102488  RXN-14200
GO:0102489  RXN-14201
GO:0102490  RXN-14205
GO:0102491  RXN-14208
GO:0102493  RXN-14239
GO:0102494  RXN-14317
GO:0102495  RXN-14318
GO:0102496  RXN-14327
GO:0102498  RXN-15910
GO:0102499  RXN-14353
GO:0102500  RXN-14354
GO:0102501  RXN-14368
GO:0102502  RXN-14378
GO:0102504  RXN-14424
GO:0102505  RXN-14427
GO:0102506  RXN-14432
GO:0102507  RXN-14434
GO:0102508  RXN-14435
GO:0102509  RXN-14436
GO:0102510  RXN-14439
GO:0102511  RXN-14440
GO:0102512  RXN-14441
GO:0102513  RXN-14442
GO:0102514  RXN-14446
GO:0102515  RXN-14447
GO:0102516  RXN-14448
GO:0102517  RXN-14487
GO:0102518  RXN-14488
GO:0102520  RXN-14505
GO:0102528  RXN-14658
GO:0102529  RXN-14661
GO:0102531  RXN-14734
GO:0102532  RXN-14748
GO:0102533  RXN-14750
GO:0102534  RXN-14751
GO:0102535  RXN-14752
GO:0102536  RXN-14754
GO:0102537  RXN-14766
GO:0102538  RXN-14767
GO:0102539  RXN-14769
GO:0102540  RXN-14815
GO:0102541  RXN-14816
GO:0102542  RXN-14863
GO:0102543  RXN-14865
GO:0102544  RXN-14880
GO:0102545  RXN-14899
GO:0102549  RXN-14912
GO:0102551  RXN-14929
GO:0102552  RXN-14950
GO:0102553  RXN-14957
GO:0102554  RXN-14959
GO:0102563  RXN-15029
GO:0102566  RXN-15046
GO:0102569  RXN-15082
GO:0102570  RXN-15200
GO:0102571  RXN-15215
GO:0102574  RXN-15280
GO:0102575  RXN-15281
GO:0102576  RXN-15282
GO:0102577  RXN-15283
GO:0102580  RXN-15326
GO:0102581  RXN-15327
GO:0102582  RXN-15328
GO:0102583  RXN-15329
GO:0102584  RXN-15330
GO:0102585  RXN-15331
GO:0102586  RXN-15332
GO:0102587  RXN-15333
GO:0102588  RXN-15335
GO:0102589  RXN-15336
GO:0102590  RXN-15351
GO:0102591  RXN-15352
GO:0102592  RXN-15354
GO:0102593  RXN-15371
GO:0102594  RXN-15372
GO:0102595  RXN-15374
GO:0102599  RXN-15383
GO:0102600  RXN-15384
GO:0102602  RXN-15386
GO:0102603  RXN-15402
GO:0102607  RXN-15433
GO:0102608  RXN-15435
GO:0102610  RXN-15442
GO:0102611  RXN-15443
GO:0102612  RXN-15452
GO:0102614  RXN-15460
GO:0102620  RXN-15495
GO:0102621  RXN-15496
GO:0102622  RXN-15526
GO:0102623  RXN-15528
GO:0102624  RXN-15529
GO:0102625  RXN-15530
GO:0102626  RXN-15531
GO:0102627  RXN-15532
GO:0102628  RXN-15533
GO:0102629  RXN-15534
GO:0102630  RXN-15536
GO:0102631  RXN-15537
GO:0102632  RXN-15538
GO:0102633  RXN-15585
GO:0102634  RXN-15586
GO:0102637  RXN-15714
GO:0102638  RXN-15734
GO:0102639  RXN-15737
GO:0102640  RXN-15738
GO:0102641  RXN-15743
GO:0102643  RXN-15755
GO:0102644  RXN-15756
GO:0102645  RXN-15758
GO:0102646  RXN-15759
GO:0102647  RXN-15789
GO:0102648  RXN-15790
GO:0102649  RXN-15810
GO:0102650  RXN-15811
GO:0102652  RXN-171
GO:0102653  RXN-172
GO:0102654  RXN-1725
GO:0102655  RXN-1726
GO:0102656  RXN-1727
GO:0102657  RXN-1728
GO:0102658  RXN-2205
GO:0102659  RXN-2208
GO:0102660  RXN-2621
GO:0102661  RXN-2761
GO:0102663  RXN-292
GO:0102664  RXN-2945
GO:0102665  RXN-2947
GO:0102666  RXN-3164
GO:0102667  RXN-3165
GO:0102669  RXN-3591
GO:0102672  RXN-4121
GO:0102673  RXN-4142
GO:0102674  RXN-4181
GO:0102675  RXN-4208
GO:0102676  RXN-4209
GO:0102677  RXN-4225
GO:0102678  RXN-4229
GO:0102679  RXN-4230
GO:0102680  RXN-4231
GO:0102681  RXN-4301
GO:0102685  RXN-4721
GO:0102686  RXN-4722
GO:0102687  RXN-4724
GO:0102688  RXN-4725
GO:0102689  RXN-4727
GO:0102690  RXN-4728
GO:0102691  RXN-4729
GO:0102692  RXN-4730
GO:0102693  RXN-4731
GO:0102694  RXN-4732
GO:0102695  RXN-4733
GO:0102696  RXN-4734
GO:0102697  RXN-4736
GO:0102698  RXN-4781
GO:0102700  RXN-5105
GO:0102702  RXN-5122
GO:0102706  RXN-6242
GO:0102707  RXN-6461
GO:0102708  RXN-6462
GO:0102709  RXN-6464
GO:0102711  RXN-6541
GO:0102712  RXN-6542
GO:0102713  RXN-6543
GO:0102714  RXN-6544
GO:0102715  RXN-6546
GO:0102716  RXN-6547
GO:0102719  RXN-6741
GO:0102722  RXN-6903
GO:0102723  RXN-7062
GO:0102724  RXN-7063
GO:0102725  RXN-708
GO:0102727  RXN-710
GO:0102728  RXN-711
GO:0102729  RXN-715
GO:0102730  RXN-716
GO:0102731  RXN-7185
GO:0102732  RXN-7186
GO:0102733  RXN-719
GO:0102734  RXN-720
GO:0102737  RXN-7577
GO:0102738  RXN-7589
GO:0102739  RXN-7591
GO:0102742  RXN-7632
GO:0102743  RXN-7653
GO:0102744  RXN-7658
GO:0102745  RXN-7659
GO:0102746  RXN-7660
GO:0102747  RXN-7663
GO:0102748  RXN-7664
GO:0102749  RXN-7665
GO:0102750  RXN-7666
GO:0102752  RXN-7669
GO:0102753  RXN-7673
GO:0102754  RXN-7674
GO:0102755  RXN-7680
GO:0102759  RXN-773
GO:0102760  RXN-774
GO:0102762  RXN-7754
GO:0102764  RXN-777
GO:0102765  RXN-7770
GO:0102767  RXN-7777
GO:0102768  RXN-7785
GO:0102769  RXN-7793
GO:0102770  RXN-7795
GO:0102772  RXN-14250
GO:0102773  RXN-7799
GO:0102774  RXN-7822
GO:0102775  RXN-7826
GO:0102776  RXN-7828
GO:0102777  RXN-7842
GO:0102780  RXN-7876
GO:0102781  RXN-7877
GO:0102782  RXN-7878
GO:0102784  RXN-7884
GO:0102785  RXN-7886
GO:0102787  RXN-7997
GO:0102788  RXN-7998
GO:0102789  RXN-8005
GO:0102790  RXN-8006
GO:0102791  RXN-8008
GO:0102792  RXN-8014
GO:0102794  RXN-8089
GO:0102795  RXN-8090
GO:0102796  RXN-8091
GO:0102797  RXN-8093
GO:0102798  RXN-8094
GO:0102799  RXN-8134
GO:0102800  RXN-8138
GO:0102803  RXN-8149
GO:0102804  RXN-8151
GO:0102806  RXN-8170
GO:0102807  RXN-8176
GO:0102808  RXN-8177
GO:0102809  RXN-8178
GO:0102812  RXN-8204
GO:0102813  RXN-8205
GO:0102814  RXN-8232
GO:0102815  RXN-8233
GO:0102816  RXN-8234
GO:0102817  RXN-8235
GO:0102818  RXN-8236
GO:0102819  RXN-8237
GO:0102820  RXN-8238
GO:0102821  RXN-8239
GO:0102822  RXN-8262
GO:0102823  RXN-8266
GO:0102825  RXN-8268
GO:0102826  RXN-8270
GO:0102827  RXN-8282
GO:0102828  RXN-8284
GO:0102829  RXN-8285
GO:0102830  RXN-8286
GO:0102831  RXN-8287
GO:0102832  RXN-8288
GO:0102833  RXN-8292
GO:0102834  RXN-8294
GO:0102835  RXN-8295
GO:0102836  RXN-8296
GO:0102837  RXN-8297
GO:0102838  RXN-8298
GO:0102839  RXN-8299
GO:0102840  RXN-8301
GO:0102841  RXN-8302
GO:0102842  RXN-8303
GO:0102843  RXN-8304
GO:0102844  RXN-8305
GO:0102845  RXN-8307
GO:0102846  RXN-8308
GO:0102847  RXN-8309
GO:0102848  RXN-8310
GO:0102849  RXN-8314
GO:0102850  RXN-8316
GO:0102851  RXN-8318
GO:0102852  RXN-8319
GO:0102853  RXN-8320
GO:0102854  RXN-8321
GO:0102856  RXN-8323
GO:0102858  RXN-8325
GO:0102859  RXN-8326
GO:0102862  RXN-8329
GO:0102863  RXN-8330
GO:0102864  RXN-8331
GO:0102865  RXN-8343
GO:0102868  RXN-8352
GO:0102869  RXN-8354
GO:0102870  RXN-8355
GO:0102872  RXN-8361
GO:0102873  RXN-8363
GO:0102874  RXN-8365
GO:0102875  RXN-8366
GO:0102880  RXN-8419
GO:0102881  RXN-8421
GO:0102882  RXN-8423
GO:0102886  RXN-8428
GO:0102888  RXN-8431
GO:0102889  RXN-8432
GO:0102892  RXN-8479
GO:0102893  RXN-8480
GO:0102894  RXN-8481
GO:0102898  RXN-8517
GO:0102899  RXN-8532
GO:0102900  RXN-8534
GO:0102901  RXN-8536
GO:0102902  RXN-8538
GO:0102907  RXN-8622
GO:0102910  RXN-8677
GO:0102911  RXN-8680
GO:0102912  RXN-8681
GO:0102916  RXN-8696
GO:0102920  RXN-8809
GO:0102924  RXN-886
GO:0102925  RXN-8875
GO:0102926  RXN-8882
GO:0102927  RXN-8883
GO:0102928  RXN-8884
GO:0102929  RXN-8911
GO:0102931  RXN-8931
GO:0102932  RXN-8936
GO:0102935  RXN-9012
GO:0102936  RXN-9013
GO:0102937  RXN-9014
GO:0102938  RXN-9017
GO:0102939  RXN-9018
GO:0102940  RXN-9020
GO:0102941  RXN-9021
GO:0102942  RXN-9022
GO:0102944  RXN-9035
GO:0102945  RXN-9037
GO:0102946  RXN-9038
GO:0102947  RXN-9045
GO:0102948  RXN-9081
GO:0102949  RXN-9082
GO:0102950  RXN-9083
GO:0102951  RXN-9084
GO:0102953  RXN-9157
GO:0102954  RXN-9162
GO:0102966  RXN-9356
GO:0102972  RXN-947
GO:0102979  RXN-9564
GO:0102980  RXN-9565
GO:0102981  RXN-9567
GO:0102983  RXN-9589
GO:0102989  RXN-9618
GO:0102996  RXN-9721
GO:0102997  RXN-9726
GO:0102999  RXN-9743
GO:0103000  RXN-9748
GO:0103002  RXN-9802
GO:0103003  RXN-9804
GO:0103004  RXN-9805
GO:0103005  RXN-9806
GO:0103006  RXN-9807
GO:0103008  RXN-9864
GO:0103009  RXN-9908
GO:0103010  RXN-991
GO:0103016  RXN0-2023
GO:0103027  RXN0-5187
GO:0103028  RXN0-5190
GO:0103033  RXN0-5363
GO:0103035  RXN0-5387
GO:0103036  RXN0-5388
GO:0103037  RXN0-5410
GO:0103040  RXN0-6371
GO:0103041  RXN0-6385
GO:0103044  RXN0-6726
GO:0103046  RXN0-6981
GO:0103047  RXN0-6994
GO:0103050  RXN0-7119
GO:0103057  RXN1F-169
GO:0103058  RXN1F-443
GO:0103060  RXN1F-475
GO:0103061  RXN1G-4141
GO:0103062  RXN1G-4142
GO:0103063  RXN1G-4143
GO:0103066  RXN66-18
GO:0103067  RXN66-23
GO:0103068  RXN66-336
GO:0103071  RXN66-471
GO:0103072  RXN66-475
GO:0103082  RXNQT-4166
GO:0103083  RXNQT-4167
GO:0103085  RXNQT-4169
GO:0103086  RXNQT-4170
GO:0103088  RXNQT-4172
GO:0103089  RXNQT-4173
GO:0103091  RXNQT-4175
GO:0103092  RXNQT-4176
GO:0103098  RXNQT-4311
GO:0103099  RXNQT-4324
GO:0103100  RXNQT-4325
GO:0103101  RXNQT-4326
GO:0103102  RXNQT-4327
GO:0103103  RXNQT-4328
GO:0103104  RXNQT-4331
GO:0103105  RXNQT-4345
GO:0103106  RXNQT-4397
GO:0103107  RXNQT-4398
GO:0103113  TRANS-RXN-220
GO:0106339  RXN-11866
GO:0140111  RXN-16470
GO:0140326  3.6.3.1-RXN
GO:0140397  RXN-9493
GO:0140399  RXN-9502
GO:0140680  RXN-8661
GO:0140741  TRNA-S-TRANSFERASE-RXN
GO:0140818  POLYNUCLEOTIDE-5-PHOSPHATASE-RXN
GO:0160129  RXN-21016
GO:1901238  TRANS-RXN-242B
GO:1990137  RXN-11819
sjm41 commented 6 months ago

Thanks @balhoff

I realise another complication here is that RHEA will sometimes have a MetaCyc xref specifically on a directional RHEA - this is correct in that MetaCyc sometimes only has the directional reaction in their database, but it also means that the directional MetaCyc is the only MetaCyc ID we can include as an xref on a (non-directional) GO term.

E.g. "GO:0004169 2.4.1.109-RXN" is included in your list above as GO-to-MetaCyc xref not found in RHEA. But RHEA does make that association on the directional RHEAs shown on these entries: https://www.rhea-db.org/rhea/53396 https://www.rhea-db.org/rhea/17377

(Secondary problem here is that that RHEA:53396 and RHEA: 17377 also need adding as narrow xrefs on GO:0004169)

So I think your query does need to accommodate MetaCyc xrefs in RHEA that might only appear on directional RHEAs - that might reduce (a bit) the number of lines to review.

cmungall commented 6 months ago

MetaCyc xrefs from RHEA are always directional, see the analysis I did a few years ago (the numbers will have changed but the structural organization is likely the same):

https://github.com/cmungall/reactioner/blob/master/GO-Rhea-Analysis.ipynb

sjm41 commented 6 months ago

Ah OK, thanks @cmungall. So the reason my example ("GO:0004169 2.4.1.109-RXN") was included in Jim's list is just because we don't currently have the RHEA xrefs on that GO term.

Thanks too for pointing me towards your code for analysing these xrefs - looks extremely useful, though I might need to ask you to go through it with me at some point....

pgaudet commented 6 months ago

@balhoff will run Boomer another time, which should identify some of these missing mappings, and they he will re-run this mapping check.

pgaudet commented 3 months ago

Will close for now; this will need to be re-ran after the Enzyme Jamboree of Jun 2024.